Gene SeHA_C0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0030 
Symbol 
ID6489965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp31774 
End bp32409 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content55% 
IMG OID642740324 
Productfimbrial chaperone 
Protein accessionYP_002043998 
Protein GI194451463 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.292301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGATTG GCGGTACTCG CTTTATCTAT CATGCGGGCG CCCCGGCATT AAGCGTACCG 
GTAAGTAACC ATTCAGAAGC GTCCTGGTTA ATTGATACGC ATATTTTACC TGGTGGCCGC
TGGCCTGGAA CCAAAAACGA AGGGAATATC ATGCCCTTCG TGGTCACGCC GCCATTATTT
ATGCTTTCAG CGCGCCAGGA AAACTCAATG CGGGTGGTTT ATACCGGCGC ACCGCTACCC
GCCGACAGGG AAAGTCTGTT TACCTTGAGT ATCGCCGCTA TTCCCTCCGG TAAACCGGAA
GCGAACCGTG TACAAATGGC GTTTCGTTCG GCTTTAAAAT TGCTCTATCG CCCTGAGGGA
CTCGCCGGCA ATCCGCAGCA GGCCTACCGG CATCTGATCT GGTCGCTTAC CCCCGATGGC
GCGACGGTAC GCAATCCGAC ACCCTATTAC GTTACGCTCT TTTTATTACG CGCTAATGAG
CGCGCCCAGG ACAACGCCGG GGTCGTGGCT CCCTTTGCAA CGCGTCAAAC GGACTGGTGC
CGGCACACGG TTCGCTGCAC TGTGCGCTGG CAAAGTATTA ATGACTATGG GCGGGTAATG
CCAGCGCAAA CCGTGGATCT GACGCGTATT CATTAA
 
Protein sequence
MVIGGTRFIY HAGAPALSVP VSNHSEASWL IDTHILPGGR WPGTKNEGNI MPFVVTPPLF 
MLSARQENSM RVVYTGAPLP ADRESLFTLS IAAIPSGKPE ANRVQMAFRS ALKLLYRPEG
LAGNPQQAYR HLIWSLTPDG ATVRNPTPYY VTLFLLRANE RAQDNAGVVA PFATRQTDWC
RHTVRCTVRW QSINDYGRVM PAQTVDLTRI H