| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_B0102 |
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| Symbol | |
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| ID | 6870824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011204 |
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| Strand | - |
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| Start bp | 60342 |
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| End bp | 62972 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642783238 |
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| Product | pilx4 protein |
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| Protein accession | YP_002213932 |
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| Protein GI | 198241712 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 93 |
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| Fosmid unclonability p-value | 0.894843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGCCC TTATTCTTCC TGGCTGGTAT GCCATCAGGC GTGTAACACA GTTTGATGAA
CGCTTTTTTG ACCTTCTGTA TCTGAGAACT CTTGTCAAAG GGCATCCTTT ATCAAACAAG
CGATTCAGCG CAGTCCATTA TGCGGGGAGC CAGTACGACG AAGTTGATAT TTCAAAAGTG
GATAACTTTA TGAAGCTGAA AGACCAGTCT TCTGTTGAAG AGTTAATTCC GTACTCTTCA
CATATCACTG ATAATATTAT CGTTACAAAA AACCGGGATT TGCTGGCAAC CTGGCAGATA
GACGGTGCTT ACTTTGAGTG TGTTGATTCT GAAGATTTGT CAATTCTGAC AGATCAGCTT
AATACGCTTA TACGTAGCTT TGAAGGGAAA TCTGTTACGC TTTATCCTCA TCGTATCAGG
TGTAAAAAGG ACGTCAGACC AGTATTTAAC AGTAAAATTC CTTTTGTGAA CAGAGTAATG
AATGATTATT ACGAGTCATT CCCTCAGTCT GAATTTTTCG AGAATAAATT ATTTCTGACG
ATTTGTTTTA AACCTTTTAC TACGGAAGAT AAAGTAACAC ATTTCTTTTC ACGCAGTAAA
AAACAAAAAG ATATCTTTAA AGAGCCTGTT AATGAAATGA ATGAAATTTG CGACAGGTTG
AATACCTATC TGTCCCGTTT TCATTCCCGA CGTCTTGGGC TTTATGAAGA TCATGGGGTT
GTTTATTCAG ATCAGTTATC TCTGTTCCAG TATCTACTTT CTGGTCGATG GCAAAAGGTC
AGGGTTAGCA GTAGTCCGTT TTATACATAT CTGGGAGGAA AAGACCTGTT CTTTGGTAAT
GATGCCGGAC AAATTACCGC GTCAGACCAT GCCCGGTATT TTCGTTGCAT AGAGATTAAG
GATTATTTTC AGGAGACGGA TGCCGGTATT CTGGATGCTC TGATGTATCT CCCCGTTGAG
TATGTCGTGA CATCGTCCTT TACTGCGATG GATAAGCAGT CAGCGATTAA GGCGCTGGAT
GATCAGATCG ATAAGCTGGA AATGACAGAT GATGCTGCCA AATCTTTGCT GGCAGATCTG
AAAGTCGGAC TGGATATGGT TTCCAGTGGA TATATTTCTT TCGGGAAATC GCATCAGACC
CTGGTTGTCT TTGCGGATTC ACCGGAGCGT CTGGTGAAAG ACACCAATAT CGTGACTTCC
ACTCTGGAAG ATTTGGGGCT GATTGTCACT TATTCAACAC TGAGTCTTGG CGCAGCTTAT
TTTGCTCAGC TACCAGGAAA TTATACGCTT CGCCCTCGTC TGAGTACCCT CAGTAGTCTT
AATTTTGCCG AAATGGAAAG TTTTCATAAT TTCTTTTCAG GAAAAGAAAA AGGAAATACC
TGGGGGGAAA AACTGATTAC TCTTCGGGGG TCAGGTAATG ATATCTACCA TCTGAATTAC
CATATGACGA CTGAACATCA GAATTTCTTC GGTAAGAACC CGACGCTGGG GAATACCGAA
ATTCTCGGTA CGTCTAACGT GGGTAAAACC GTATTACTGA TGACAAAAGC ATTTGCCGCC
CAGCAGTTCG GTACGCCGGA ATCATTCCCT GCAAACAGAA AACTGAAAAA ACTGACCACG
GTTTTTTTCG ATAAAGACCG GGCAGGTGAA GTCGGTATAC GGGCAATGGG GGGATCTTAT
TACCGGGTGA AGGAGGGAGA GCCGACAGGC TGGAATCCCG CCGCACTGCC GCCAACAAAA
CGTAATATCG CTTTTATGAA GGACCTGGTG AGGCTGCTTT GTACTCTCAA CAGTGAGCCG
CTCGATGATT ACCAGAACAG CCTGATTTCA GATGCGGTTG AACGTCTTAT GCAACGGTCA
GATCGCTCTT ATCCTATCAG TAAACTACGG CCTCTTATCC AGGAGCCGGA TGATACTGAA
ACCAAACGTC ATGGACTTAA AGCCCGTCTT AAGCCGTGGA CGCAGGGGGA AGAGTTTGGC
TGGGTGTTCG ACAATCGGGA AGACACGTTT GATGTCGATA ACCTGGATGT TTTCGGTATT
GATGGAACGG AGTTCCTGGA TAATAAGGTG CTGGCCAGTG CTGCTTCATT CTATCTCATC
TATCGGGTCA CCATGTTGGC CGATGGTCGC AGGCTTCTTA TCTACATGGA TGAGTTCTGG
CAATGGATCA ATAACGAAGC GTTCAGGGAC TTTGTTTACA ACAAGCTGAA AACCGGACGT
AAACTCGATA TGGTGCTTGT CGTAGCCACA CAGTCACCGG ATGAACTGAT TAAATCACCC
ATTGCGGCAG CGGTTCGTGA GCAATGCGCC ACTCATATCT ATCTGGCAAA CCCGAAAGCC
AAACGTAGTG AATATGTTGA TGGTTTGCAG GTCAGGGAGC TTTATTTTGA CAAAATTAAA
GCTATTGATC CGCTGTCCCG CCAGTTCCTG GTTGTTAAGA ACCCACAGAG GAAAGGTGAA
AGTGATGATT TTGCTGCTTT TGCCAGACTG GAGCTGGGAA AAGCAGCGTA TTACTTACCG
GTTCTCAGTG CATCAAAACC CCAGTTAGAA CTGTTCGATG AAATCTGGAA AGAAGGAATG
AAGCCGGAAG AGTGGCTTGA TACCTATCTG GAACAGGCGA ACCTTATTTG A
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| Protein sequence | MYALILPGWY AIRRVTQFDE RFFDLLYLRT LVKGHPLSNK RFSAVHYAGS QYDEVDISKV
DNFMKLKDQS SVEELIPYSS HITDNIIVTK NRDLLATWQI DGAYFECVDS EDLSILTDQL
NTLIRSFEGK SVTLYPHRIR CKKDVRPVFN SKIPFVNRVM NDYYESFPQS EFFENKLFLT
ICFKPFTTED KVTHFFSRSK KQKDIFKEPV NEMNEICDRL NTYLSRFHSR RLGLYEDHGV
VYSDQLSLFQ YLLSGRWQKV RVSSSPFYTY LGGKDLFFGN DAGQITASDH ARYFRCIEIK
DYFQETDAGI LDALMYLPVE YVVTSSFTAM DKQSAIKALD DQIDKLEMTD DAAKSLLADL
KVGLDMVSSG YISFGKSHQT LVVFADSPER LVKDTNIVTS TLEDLGLIVT YSTLSLGAAY
FAQLPGNYTL RPRLSTLSSL NFAEMESFHN FFSGKEKGNT WGEKLITLRG SGNDIYHLNY
HMTTEHQNFF GKNPTLGNTE ILGTSNVGKT VLLMTKAFAA QQFGTPESFP ANRKLKKLTT
VFFDKDRAGE VGIRAMGGSY YRVKEGEPTG WNPAALPPTK RNIAFMKDLV RLLCTLNSEP
LDDYQNSLIS DAVERLMQRS DRSYPISKLR PLIQEPDDTE TKRHGLKARL KPWTQGEEFG
WVFDNREDTF DVDNLDVFGI DGTEFLDNKV LASAASFYLI YRVTMLADGR RLLIYMDEFW
QWINNEAFRD FVYNKLKTGR KLDMVLVVAT QSPDELIKSP IAAAVREQCA THIYLANPKA
KRSEYVDGLQ VRELYFDKIK AIDPLSRQFL VVKNPQRKGE SDDFAAFARL ELGKAAYYLP
VLSASKPQLE LFDEIWKEGM KPEEWLDTYL EQANLI
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