Gene SeD_B0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0099 
Symbol 
ID6870911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand- 
Start bp58202 
End bp59335 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content42% 
IMG OID642783235 
Productpilx6 protein 
Protein accessionYP_002213929 
Protein GI198241713 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0519524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value0.478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATTG TCACTGGTAT ACCGGATGGT ACTGATTTAT CAGGTAATGT AACCTCTCCC 
GCAAATGCGG GAGGTGTTCC TGGGTTTAAT TCTGATTTTT TTCAGACAAC TCATGAAGTT 
ATATTTAATA TTCTCAATAA GAGTATATCT GGAAAATTAA GTGAATATTC AGATGTGGCT 
TATACTCTTG GTAAATATGG AGTTTCTCTG TATGTTTTAT GGTATGCCTT TACTGTATTA 
GCAAGGAAAC AACAGACACC TGTACCTGAT TTTATCTGGA ATATCTGTAG GTTTTACATA 
ATATTGCTTT TTGTTAAGAA TACAGGGGGA ATACTTACAT CAGCAACAGA TGCTATTGAT 
GGATTGAAAA ATACATTGGC AGGGGGAGAT CCGTGGGTAT GGATGGATCA GTTATGGGTG 
AAGGTTATAC AAGTTGCAAC TCTTATTTTT GATAAAGATA CATCTACTGT GCCTGTTGCC 
GGTGGGATTG GTGCTTTATT AACTTATGTT GGTGGAGTTT TGGCATTATT GCTTTGTTCT 
ATAGTATTTG CATCTGCTGA ATTAACATTA CTATTACTTT CTGTCACTGC GCCAATATTT 
ATCATGTGTT TGATGTTTGG TTTCCTTCGG CAAATGTTTA ATAGCTGGCT ACAGCTTAAT 
TTTAGCTCGT TACTGGTTTT TCTATTTGCA GCATTAGCAC TAAGAGCTGG GACATGGCAA 
TTAAACATGG CATTAAGTAC GTCTATTGCT ACAGCATCAG AAAACAATCT TCTTCAAACG 
GGAGTAACTT CATTAGCTGC TGGCATTTTC ATGGCCTGGA TTATCTGGCA GGCGAAAAGT 
TATGCTTCAC AGATTGCAGG TGTGGGTGTT GAAGGTGCCA TGCAGGGCGC AGCCGCTATG 
GGGATTGGTG CTGGCGTTTT CGGTGCATCC CGTATGGCGC GTGGCGCACT TGGTATGGGC 
AGAAATGCCG GTATTGGTGC ATGGAAAGGT CTGCGTCGTC AGGAAGGCGG GTTTGGTCAG 
TCTCCGGGAA TAACGGGTAA GACCGCTAAC CTGGCCGGAC AGGGCGTTAA TATTGGTGCC 
AAAAAGCTTC GTCAGGCAGC TATTGAGAGG GCAAAGAAAA TGTATGGAGG GTGA
 
Protein sequence
MGIVTGIPDG TDLSGNVTSP ANAGGVPGFN SDFFQTTHEV IFNILNKSIS GKLSEYSDVA 
YTLGKYGVSL YVLWYAFTVL ARKQQTPVPD FIWNICRFYI ILLFVKNTGG ILTSATDAID 
GLKNTLAGGD PWVWMDQLWV KVIQVATLIF DKDTSTVPVA GGIGALLTYV GGVLALLLCS 
IVFASAELTL LLLSVTAPIF IMCLMFGFLR QMFNSWLQLN FSSLLVFLFA ALALRAGTWQ 
LNMALSTSIA TASENNLLQT GVTSLAAGIF MAWIIWQAKS YASQIAGVGV EGAMQGAAAM 
GIGAGVFGAS RMARGALGMG RNAGIGAWKG LRRQEGGFGQ SPGITGKTAN LAGQGVNIGA 
KKLRQAAIER AKKMYGG