Gene SeD_B0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0015 
Symbol 
ID6870901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand- 
Start bp9610 
End bp10647 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content52% 
IMG OID642783168 
Productransposase of 
Protein accessionYP_002213862 
Protein GI198241729 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.961245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones106 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCA TAGCAGCAAT TCCTGATGAA GAACGACAAC TGATGCGCAA AGAGGCCCAA 
CAAACCCACG ATAAAAACCA TGCGCGACGG CTTATCGCCA TGCTGATGCT GCATCAGGGA 
ATGACCGTCA CTGACGTTGC CAGATTACTC TGTGCCGCCC GTTCATCCGT TGGTCGATGG 
ATAAACTGGT TTACTTTACA TGGTGTTGAA GGACTAAAAA GCCTCAGACC CGGACGTGCT 
CCACGCTGGC CGGTCGCTGA TATCCTTCAG CTCTTGCCAC TATTGGTACA GCGTTCCCCG 
AAGGATTTTG GCTGGCTGCG CTCACGCTGG AGCACGGAGC TTCTGGCACT CGTCATCAAC 
CGACTTTTTG ATGTGACGCT GCACCGCTCC ACCCTGCACC GATATCTGAG GCAGGCAGAT 
ATGGTCTGGC GCGGGGCAGC GCCAACGCTG AAAATCAAAG ATCCGCACTA TGAAGAAAAA 
CGGCTTGTCA TTGATCAGGC GCTGGCTCAG GAGCAGACTG CACATCCTGT GTTTTATCAG 
GATGAAGTCG ACATCGACCT GAACCCAAAA ATTGGCGCTG ACTGGATGCC CAAAGGGCAA 
CAGAAACGCA TCGCCACGCC GGGACAGAAC CAGAAGCATT ATCTGGCAGG CGCACTGCAT 
TCAGGTACGG GACGGGTTCA CTACGTCAGT GGCAGCAGCA AGAGTTCTGA TTTATTTATC 
AGTCTGTTAG AAACGTTACG CCGTACATAC AGGCGGGCGA AAACCATCAC ACTGGTGGCG 
GATAACTACA TCATCCATAA AAGCCGCAAA GTGGAACGCT GGCTGGAAGA AAACCCGAAG 
TTCCGGTTGC TGTTCCTGCC GATGTATTCG CCGTGGCTGA ATCCGATAGA GCGACTGTGG 
TTGTCGTTAC ACGAAACCAT AACGAGAAAT CATCAGTGTC GGTACATGTG GCAGTTACTG 
AAACAGGTAG CACAATTTAT GAATGCCGCT TCACTGTTTC CCGGCAATCA ACAGGGTCTG 
GCTAAAGTGG AGCGGTAA
 
Protein sequence
MPIIAAIPDE ERQLMRKEAQ QTHDKNHARR LIAMLMLHQG MTVTDVARLL CAARSSVGRW 
INWFTLHGVE GLKSLRPGRA PRWPVADILQ LLPLLVQRSP KDFGWLRSRW STELLALVIN 
RLFDVTLHRS TLHRYLRQAD MVWRGAAPTL KIKDPHYEEK RLVIDQALAQ EQTAHPVFYQ 
DEVDIDLNPK IGADWMPKGQ QKRIATPGQN QKHYLAGALH SGTGRVHYVS GSSKSSDLFI 
SLLETLRRTY RRAKTITLVA DNYIIHKSRK VERWLEENPK FRLLFLPMYS PWLNPIERLW 
LSLHETITRN HQCRYMWQLL KQVAQFMNAA SLFPGNQQGL AKVER