Gene SeD_A4954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4954 
Symbol 
ID6871404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4788075 
End bp4789085 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content51% 
IMG OID642787824 
Productglucosamine--fructose-6-phosphate aminotransferase (isomerizing) 
Protein accessionYP_002218417 
Protein GI198245357 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2222] Predicted phosphosugar isomerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.28349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.604519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGGTT TTAATCAGGA CGAGTACCTG ACGAGTGCTC GTGAGATCAT CGCTGCGCGC 
CAGAAGGCAG AACAGGTTGC TGACGAGATT TATCAGGCCG GGTTCAGTTC TTTATTTTTC
GCCTCTGTTG GCGGTTCACT GGCGCCAATG ATGGCAATTA ATGAATTTGC CAAAGAATTA
ACAACGTTGC CGGTTTATGT TGAGCAGGCG GCAGAATTAA TTCATAAAGG AAATAAGCGG
CTGAATAAAG ACTCTGTGGT TATTACGCTG TCTAAATCCG GCGATACCAA AGAATCGGTG
GCGATCGCCG AGTGGTGTAA AGCACAGGGA ATACGCGTAG TCGCTATTAC CAAAAATGCG
GACTCTCCGC TGGCGCAGGC GGCGACATGG CATATTCCGA TGCGTCACAA AAATGGCGTG
GAATATGAAT ATATGTTGCT GTACTGGCTG TTTTTCCGCG TGCTGTCGCG CAATAACGAA
TTCGCCAGTT ACGATCGCTT CGCCAGCCAA CTGGAAATTC TGCCGGCGAA TCTGCTGAAA
GCGAAACAAA AATTTGATCC GCAGGCGGAC GCTATCGCCA GCCGTTATCA TAACAGCGAT
TATATGATGT GGGTCGGCGG CGCGGAGATG TGGGGCGAGG TCTATCTGTT CTCCATGTGT
ATCTTGGAAG AGATGCAGTG GAAGCGCACG CGCCCCGTCA GCTCTGCGGA ATTTTTCCAC
GGCGCTCTGG AGCTGCTGGA AAAAGACGTT CCGCTCATTC TGGTGAAAGG GGAAGGGAAA
TGCCGCGCGC TGGATGAACG CGTTGAGCGT TTTGCCAGTA AAATTACCGA TAACCTGGTG
GTGATTGATC CGAAAGCGTA TGCGCTGGAC GGCATTGATG ATGAGTTCCG CTGGATCATG
GCGCCCTGCG TCGTCTCGAC ACTGCTGGTT GATCGGCTGG CGGCGCACTT CGAGAAATAT
ACCGGCCACA GTCTGGATAT TCGTCGCTAC TACCGTCAGT TCGATTATTA A
 
Protein sequence
MLGFNQDEYL TSAREIIAAR QKAEQVADEI YQAGFSSLFF ASVGGSLAPM MAINEFAKEL 
TTLPVYVEQA AELIHKGNKR LNKDSVVITL SKSGDTKESV AIAEWCKAQG IRVVAITKNA
DSPLAQAATW HIPMRHKNGV EYEYMLLYWL FFRVLSRNNE FASYDRFASQ LEILPANLLK
AKQKFDPQAD AIASRYHNSD YMMWVGGAEM WGEVYLFSMC ILEEMQWKRT RPVSSAEFFH
GALELLEKDV PLILVKGEGK CRALDERVER FASKITDNLV VIDPKAYALD GIDDEFRWIM
APCVVSTLLV DRLAAHFEKY TGHSLDIRRY YRQFDY