Gene SeD_A4701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4701 
SymboldmsB 
ID6873352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4569075 
End bp4569701 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content54% 
IMG OID642787599 
Productdimethylsulfoxide reductase, chain B 
Protein accessionYP_002218197 
Protein GI198243354 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR02951] DMSO reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT ATGGCTTTTA TGTTGACTCC TCGCGCTGTT CAGGCTGTAA AACCTGCCAG 
GTAAGCTGCA AGGATAATAA AGATCTGGAT GTCGGTCCGA AACTGCGCCG CGTCTATGAA
TATGGCGGCG GAAGCTGGGT GAAAGAGGGG GAAAGCTGGC ATCACGACAC CTTTACCTAC
TACCTCTCTA TTGCTTGTAA CCATTGCGAT GAGCCGGTAT GTGTCTCCGG CTGTCCGACC
GGGGCGATGC ATAAACGCAA AGAAGATGGT CTGGTCGTGG TGGATGACAG CGTATGCGTC
GGCTGTCGTT ATTGTGAAAT GCGCTGCCCC TACGGCGCGC CGCAGTTTGA TACGCAGGCG
AACGTGATGC GTAAGTGCGA CGGTTGTCTT GACCGACTGG AGAACAATCT GCGCCCTATT
TGTGTGGATT CTTGCCCGCA GCGAGCGCTG GATTTCGGCC CTGTCGATGA ATTACGGGCA
AAATATGGCA CGGAGAATCA AATCGCGCCG CTGCCTTCGG CGTCGTTCAC CCATCCTAAC
CTCATTATTA AACCGCATCC GAAAGCGAGA CCCACGGGCG ATACGGAAGG CGCAATCATG
AACATTCGGG AGGTGCGCCA TGCATGA
 
Protein sequence
MKQYGFYVDS SRCSGCKTCQ VSCKDNKDLD VGPKLRRVYE YGGGSWVKEG ESWHHDTFTY 
YLSIACNHCD EPVCVSGCPT GAMHKRKEDG LVVVDDSVCV GCRYCEMRCP YGAPQFDTQA
NVMRKCDGCL DRLENNLRPI CVDSCPQRAL DFGPVDELRA KYGTENQIAP LPSASFTHPN
LIIKPHPKAR PTGDTEGAIM NIREVRHA