Gene SeD_A4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4399 
Symbol 
ID6875159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4246932 
End bp4247810 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content49% 
IMG OID642787320 
Productputative inner membrane protein 
Protein accessionYP_002217931 
Protein GI198246068 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCC CCGCCCTGCG CGATATTCAC ACGCTGTTTT ATCGCGGCTA TCTTAAATCG 
TGTAATTATC ATTGCGGCTA TTGCCCGTTC CATAAACACG CCCGTAACGA TAAAAAACGG 
GACGAAGCCG CGCTATGGCG CATGGTTGAC CATTTGCCTC TTTTAGGTAC GCCGTTGAAT 
GTGATGATTA CGCCCTATGG CGAGGCGCTA CGCTTGCGTT ATTACATGGC GGCGCTGGCA 
GAAATTAGCC GCTATCCTCA TGTTCAGGCG GTCGGCATAC AAACTAACGC CTCTTTTTCG 
TTAATGTCAT TGCTGGAGGC ATTTCGTGCT GGCGGCGGAG ATATCTCAAA GCTTCGGTTA 
TGGTGTTCTT TTCATCCCTC ACAAATTACC GCTGAGCGCT TTCTCCAGCA GTGTTTAGCG 
CTCTCTGCCG CCGGAATAAC CTGGTGCGCG GGGGCTGTCG CCAGTATGAA AGATATCGAC 
CAGTTTCGTT GGCTACGCCA GCGGTTGCCT GACCAGAATT ATTTTTGGTT TAACGCCAAC 
GAGTGTGCCA ATACCTGGCA TACCGTTGAG GAAACCATCG CCTTCGGCGA ACTCGATCCG 
CTGTATGTGA TTGAAACACA GCAGTGGCCA GCGCAGCTGG ATATCTGTAC CGCAGGAAGA 
AAAAGTATTT TTATGAATGC AGAAGGCGAT CTTTTTGCTT GTCATATCAG CAAAATTAAA 
ATGGGTAATT TATATCAGCA ACGGCTTAAT TCTCCCGCCT GCCAGGCAAA ACAATGCCAC 
TGTTTTCTCG CTTATCAGCA CCGTCTCGAT ATTCCATTGC TGAATCACCT GGATGCCTCA 
CGCTGTTTTA GGATCGGACG CTCATGCGAT ATCGTTTAA
 
Protein sequence
MSTPALRDIH TLFYRGYLKS CNYHCGYCPF HKHARNDKKR DEAALWRMVD HLPLLGTPLN 
VMITPYGEAL RLRYYMAALA EISRYPHVQA VGIQTNASFS LMSLLEAFRA GGGDISKLRL 
WCSFHPSQIT AERFLQQCLA LSAAGITWCA GAVASMKDID QFRWLRQRLP DQNYFWFNAN 
ECANTWHTVE ETIAFGELDP LYVIETQQWP AQLDICTAGR KSIFMNAEGD LFACHISKIK 
MGNLYQQRLN SPACQAKQCH CFLAYQHRLD IPLLNHLDAS RCFRIGRSCD IV