Gene SeD_A4346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4346 
Symbol 
ID6872567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4191526 
End bp4192146 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content55% 
IMG OID642787272 
Productthreonine efflux system 
Protein accessionYP_002217888 
Protein GI198242594 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.459932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATGC TATTTTTCAC CGTGGCAATG GTGCACATCG TTGCGCTAAT GAGCCCCGGC 
CCCGACTTTT TCTTCGTGTC TCAAACTGCT GTCAGCCGTT CGCGTAAAGA AGCGATGATG
GGCGTACTGG GCATTACCTG CGGCGTGATG GTATGGGCGG GCGTGGCGCT GCTTGGCCTG
CATCTCATCA TCGAAAAAAT GGCCTGGCTG CATACGATCA TTATGGTAGG CGGCGGCCTG
TACCTGTGCT GGATGGGCTA TCAGATGCTG CGCGGCGCGC TGAAAAAACA GGATGCGGCG
GCGTCTTCTC CGCACATTGA ACTGGCGCAG AGCGGGCGCA GTTTTCTCAA AGGGCTGTTG
ACCAATCTGT CGAATCCTAA AGCGATTATC TATTTTGGTT CCGTTTTTTC ACTGTTTGTC
GGCGATAACG TCGGCGCTGC GGCGCGCTGG GGTATTTTCG CGTTAATCAC CCTGGAAACG
CTGGCCTGGT TTACCGTAGT CGCCAGCCTG TTCGCGCTGC CGAAAATGCG CCGCGGCTAT
CAGCGTCTGG CGAAATGGAT TGATGGCTTT GCCGGCGCTC TGTTTGCGGG CTTTGGTATT
CACCTGATTA TTTCGCGCTA A
 
Protein sequence
MLMLFFTVAM VHIVALMSPG PDFFFVSQTA VSRSRKEAMM GVLGITCGVM VWAGVALLGL 
HLIIEKMAWL HTIIMVGGGL YLCWMGYQML RGALKKQDAA ASSPHIELAQ SGRSFLKGLL
TNLSNPKAII YFGSVFSLFV GDNVGAAARW GIFALITLET LAWFTVVASL FALPKMRRGY
QRLAKWIDGF AGALFAGFGI HLIISR