Gene SeD_A4266 details

Gene Information

• Locus tag: SeD_A4266
• Symbol: gidA
• ID: 6873226
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: -
• Start bp: 4110454
• End bp: 4112343
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642787196
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_002217822
• Protein GI: 198242041
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 78
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTTTATC AGGATCCTTT TGACGTCATT ATTATTGGCG GGGGTCATGC AGGCACTGAG 
GCCGCGATGG CCGCAGCGCG TATGGGTCAA CAGACTCTGC TTTTGACACA CAATATTGAC 
ACGTTGGGAC AGATGAGCTG CAACCCGGCG ATCGGCGGTA TTGGAAAGGG ACATCTGGTA 
AAAGAGGTGG ATGCGCTCGG CGGTCTGATG GCGAAAGCGA TCGATCAGGC AGGTATTCAG 
TTTAGGATAC TAAACGCCAG CAAAGGTCCG GCCGTTCGCG CTACCCGGGC TCAGGCGGAT 
CGAGTCTTAT ACCGCCAGGC GGTGCGTACC GCGCTGGAGA ATCAGCCGAA TCTGATGATC 
TTCCAGCAAG CGGTTGAAGA TCTGATTGTC GAAAACGATC GCGTTGTCGG CGCCGTGACC 
CAAATGGGGC TCAAATTCCG CGCGAAAGCG GTGGTACTGA CCGTCGGAAC CTTCCTGGAT 
GGCAAAATTC ATATTGGTCT GGATAACTAC AGCGGCGGTC GTGCTGGCGA TCCGCCATCC 
ATCCCGCTGT CTCGCCGTCT GCGTGAGCTT CCGCTACGCG TCAGCCGCCT GAAAACCGGC 
ACACCGCCGC GTATTGATGC GCGTACTATC GATTTCAGCG TGTTGGCTCA ACAGCATGGC 
GATAACCCGA TGCCGGTTTT CTCGTTTATG GGGAATGCTT CTCAGCATCC GCAACAGGTG 
CCGTGTTACA TCACGCATAC CAATGAGAAA ACCCATGACG TGATTCGTAA TAACCTCGAT 
CGTAGCCCAA TGTACGCTGG CGTGATCGAA GGGATCGGCC CGCGCTACTG TCCTTCGATC 
GAAGACAAGG TGATGCGTTT TGCCGATCGT AACCAGCATC AGATCTTCCT TGAGCCGGAA 
GGACTGACCT CTAACGAGAT TTACCCTAAC GGTATCTCCA CCAGCCTGCC GTTTGACGTG 
CAGATGCAGA TTGTCCGTTC CATGCAGGGC ATGGAGAACG CGAAGATCGT TCGTCCTGGT 
TATGCGATTG AGTACGATTT CTTCGACCCG CGCGATCTGA AACCGACTCT GGAAAGTAAA 
TTTATTCACG GCCTGTTCTT TGCTGGTCAA ATCAACGGTA CTACCGGCTA TGAAGAGGCT 
GCGGCGCAGG GCTTGCTCGC TGGTCTGAAT GCCGCGCGTC TTTCCGCCGA CAAAGAGGGC 
TGGGCGCCTG CGCGTTCTCA GGCTTATCTC GGCGTGCTGG TGGACGATCT CTGTACGCTG 
GGCACCAAAG AGCCGTATCG CATGTTTACC TCCCGCGCCG AATATCGCCT GATGCTGCGT 
GAGGACAACG CCGATCTGCG TCTGACCGAA ATGGGCCGCG AGCTGGGTCT GGTGGATGAT 
GAACGCTGGG CGCGCTTCAA CGAGAAGCTG GAAAGTATCG AACGCGAACG TCAGCGGCTG 
AAATCGACAT GGGTAACGCC GTCTGCGGAA TCCGCCGATG AAGTGAATGC GCATTTGACC 
ACGCCTCTCT CCCGTGAGGC CAGCGGCGAA GATCTGTTGC GTCGTCCGGA AATGACCTAC 
GCGCAGCTCA CTTCGCTTGC CGCATTCGCG CCTGCGCTTG AAGATGAGCA AGCCGCTGAG 
CAAGTGGAAA TCCAGGTCAA ATACGAAGGC TATATCGCTC GCCAGCAGGA TGAGATTGAA 
AAACAACTAC GTAACGAGAA TACGTTGCTG CCTGCCACGC TGGATTATCG TCAGGTTTCC 
GGTCTGTCGA ACGAAGTTAT CGCCAAGCTG AACGATCATA AACCGGCGTC TATCGGCCAG 
GCATCGCGTA TCTCCGGCGT TACGCCAGCG GCAATCTCCA TTCTGCTGGT ATGGCTGAAA 
AAACAAGGTA TGCTGCGTCG TAGCGCTTGA 

 

Protein sequence

MFYQDPFDVI IIGGGHAGTE AAMAAARMGQ QTLLLTHNID TLGQMSCNPA IGGIGKGHLV 
KEVDALGGLM AKAIDQAGIQ FRILNASKGP AVRATRAQAD RVLYRQAVRT ALENQPNLMI 
FQQAVEDLIV ENDRVVGAVT QMGLKFRAKA VVLTVGTFLD GKIHIGLDNY SGGRAGDPPS 
IPLSRRLREL PLRVSRLKTG TPPRIDARTI DFSVLAQQHG DNPMPVFSFM GNASQHPQQV 
PCYITHTNEK THDVIRNNLD RSPMYAGVIE GIGPRYCPSI EDKVMRFADR NQHQIFLEPE 
GLTSNEIYPN GISTSLPFDV QMQIVRSMQG MENAKIVRPG YAIEYDFFDP RDLKPTLESK 
FIHGLFFAGQ INGTTGYEEA AAQGLLAGLN AARLSADKEG WAPARSQAYL GVLVDDLCTL 
GTKEPYRMFT SRAEYRLMLR EDNADLRLTE MGRELGLVDD ERWARFNEKL ESIERERQRL 
KSTWVTPSAE SADEVNAHLT TPLSREASGE DLLRRPEMTY AQLTSLAAFA PALEDEQAAE 
QVEIQVKYEG YIARQQDEIE KQLRNENTLL PATLDYRQVS GLSNEVIAKL NDHKPASIGQ 
ASRISGVTPA AISILLVWLK KQGMLRRSA