Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4213 |
Symbol | torC |
ID | 6871450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4056399 |
End bp | 4057583 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642787146 |
Product | trimethylamine-N-oxide reductase c-type cytochrome TorC |
Protein accession | YP_002217772 |
Protein GI | 198242883 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAAAC TCTGGAGAGC GCTACTCAGG CCAAGCGCCC GTTGGTCGAT ACTGGCGCTG GTCATTGTCG GGATTGTGAT CGGCGTTGCG CTGATCGTGT TACCTCACGT CGGTATCAAA CTGACCAGTA CGACAGAGTT TTGCGTCAGC TGCCATAGTA TGCAGCCGGT GTATCAGGAA TATAAACAGT CCGTACATTT CCAGAATGCT TCCGGCGTAC GCGCGGAATG CCACGATTGC CATATCCCCC CTGATATTCC AGGCATGGTG AAACGTAAGC TGGAAGCCAG CAACGATCTT TACCAGACAT TTATCGCCCA CTCGATTGAT ACCCCGGAAA AATTTGAAGC CAAACGCGCC GAGCTTGCCG AGCGTGAATG GGCGCGCATG AAAGAGAATA ACTCCGCGAC CTGTCGTTCC TGCCATAACT ACGATGCGAT GGATCACGCG AAACAGAACC CGGAAGCGGC GCGGCAAATG AAAATCGCCG CGAAAGAAAA TCAGTCCTGC ATCGACTGCC ATAAAGGGAT TGCCCACCAG CTACCGGATA TGAGCAGCGG TTTCCGCAAA CAGTTTGATG AACTGCGCGC CAGCGCCAGT ACGCATAATG ACGGCGATAC GCTCTATTCG CTGGATATCA AGCCGATTTA CGCCGCTAAA GGCGATAAAG AACCGGCAGG TTCGCTGTTA CCTGCTTCTG AAGTGAAAGT CCTTAAACGG GACGGTGACT GGCTGCAAGT GCAAATCGAA GGCTGGACGG AGACGGACGG TCGCCAGCGT GTACTGACGC AGTTGCCCGG TAAACGTATT TTTGTCGCCT CGATTCGCGG CGATGTGCAA CAGCATGTGA AAACGCTGGA AGAGACCACC GTCGCGGCGA CCAATACTCA GTGGAGCAAA TTACAGGCAA CTGCGTGGAT GCAAAAAGGC GACATGGTAA ATGACATTAA ACCGATTTGG GCCTATGCCG ACTCCCTCTA TAACGGCACC TGTAATCAGT GTCACGGCGC GCCGGACAAA GCGCACTTTG ACGCTAACGG CTGGATCGGC ACGCTCAACG GCATGATCGG TTTCACCAGT CTGGATAAGC GTGAAGAACG TACCTTGTTG AAATATCTCC AGATGAATGC GTCTGATACC ACCAACACGC CGCACAGCGA TAAGGGAGAA CACAATGAAA AATAA
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Protein sequence | MRKLWRALLR PSARWSILAL VIVGIVIGVA LIVLPHVGIK LTSTTEFCVS CHSMQPVYQE YKQSVHFQNA SGVRAECHDC HIPPDIPGMV KRKLEASNDL YQTFIAHSID TPEKFEAKRA ELAEREWARM KENNSATCRS CHNYDAMDHA KQNPEAARQM KIAAKENQSC IDCHKGIAHQ LPDMSSGFRK QFDELRASAS THNDGDTLYS LDIKPIYAAK GDKEPAGSLL PASEVKVLKR DGDWLQVQIE GWTETDGRQR VLTQLPGKRI FVASIRGDVQ QHVKTLEETT VAATNTQWSK LQATAWMQKG DMVNDIKPIW AYADSLYNGT CNQCHGAPDK AHFDANGWIG TLNGMIGFTS LDKREERTLL KYLQMNASDT TNTPHSDKGE HNEK
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