Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4212 |
Symbol | torA |
ID | 6873216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4053857 |
End bp | 4056409 |
Gene Length | 2553 bp |
Protein Length | 850 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642787145 |
Product | trimethylamine-N-oxide reductase TorA |
Protein accession | YP_002217771 |
Protein GI | 198242214 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases [TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA AGGACGCGCT ACACGTCTCT CGTCGACGTT TTCTGGCGCA GCTTGGCGGT TTGACGGTGG CAGGAATGCT GGGGCCGTCA CTGCTGACGC CCCGTAGCGC CCGCGCAGCG GATGCCGTTG CGCCAGGTGC CGCGACGAAA GAGGGTATCC TGACCGGTTC TCACTGGGGG GCGATTCGCG CCACGGTGGT TGACGGTCGA TTTGTGGCGG CAAAACCGTT TGAACAGGAT AAATACCCGT CCAAAATGAT CGCCGGTCTG CCCGATCACG TCCACAACGC GGCGCGTATC CGTTATCCGA TGGTGCGTGT CGACTGGATG CGCAAAGGTC ATCAAAGCGA CACCTCTCAG CGCGGCGATA ATCGTTTTGT GCGCGTCTCC TGGGATGAAG CGCTGGATCT GTTCTATCAG GAACTGGAGC GGGTGCAAAA AACCTACGGG CCGAGCGCGT TACTGACGGC GAGCGGCTGG CAATCTACCG GCATGTTCCA TAACGCCTCC GGGATGCTGG CGCGCGCGAT TGCGCTACAT GGCAATAGCG TTAGCACGGG AGGGGACTAT TCGACCGGCG CGGCGCAGGT GATTCTGCCG CGCGTGGTGG GTTCAATGGA AGTGTACGAG CAGCAAACGT CATGGCCTCT GGTTTTACAG AACAGTAAAA CGATTGTGCT ATGGGGTTCT GATATGGTGA AAAACCAGCA GGCAAACTGG TGGTGCCCGG ATCACGATGT CTATCAGTAC TATGAACAAT TAAAAGAGAA GGTTGCCAGC GGCGCTATCT CGGTCATCAG CATCGACCCG GTCGTCACCT CCACGCACGA TTATCTGGGG CGCGATAAGG TCAAACATAT CGCCATTAAC CCGCAGACGG ATGTCCCGTT ACAACTGGCG CTGGCGCATA CCCTGTACAG CGAGAAACTG TACGATAAAA ATTTCCTCGA TAACTACTGC GTCGGTTTTG ACCAGTTCCT GCCCTATTTG CTGGGCGAGA AAGATGGACA GCCCAAAGAT GCCGCCTGGG CGGAAAAACT GTGCGGTATT GACGCCGACA CCATCCGCGC GTTGGCGCGG CAGATGGCGG GCGACAGAAC GCAAATCATC GCTGGCTGGT GCGTACAACG TATGCAGCAT GGCGAACAGT GGTCATGGAT GGTCGTCGTG CTGGCGGCAA TGCTGGGACA GATTGGTTTA CCGGGCGGCG GCTTTGGTTT TGGCTGGCAC TACAACGGCG CCGGGACGCC TGGCCGTAAA GGGATCATTT TAAGCGGCTT TTCCGGTTCG ACGACCGTTC CGCCAGTGCA CGACAGCACG GATTACAAAG GCTACAGCAG CACCATTCCT ATTGCGCGTT TTATGGATGC CATCCTTGAA CCGGGCAAGG ACATTAACTG GAACGGCAAA TCGGTTAAAT TACCGCCGCT GAAGATGTGC GTGTTCGCCG GAACCAACCC GTTCCACCGA CACCAACAAA TTAACCGCAT AATTGAAGGC TGGCGCAAGC TGGAAACGGT CATCGCTATT GATAACCAGT GGACGTCGAC CTGCCGCTTT GCGGATATCG TTTTGCCGGC TACCACCCAA TTTGAGCGTA ACGACCTCGA TCAGTTCGGC AACCACTCTA ACCGCGGCAT TATCGCCATG AAACAGGTGG TGTCGCCGCA GTTTGAAGCG CGTAACGACT TTGATATTTT CCGCGATCTC TGCCGACGCT TTAACCGTGA AGCGGCATTC ACGGAAGGTC TTGATGAAAT GGGCTGGCTG AAACGCATCT GGCAGGAAGG GAGCCAGCAG GGAAAAGGTC GCGGTATCCA CTTACCGACT TTCGAGGTGT TCTGGAATCA ACAGGAGTAC ATCGAGTTTG ATCATCCGCA GATGTTTGTG CGCCATCAGG CTTTCCGTGA AGATCCGGAC CTGGAGCCGT TGGGCACGCC AAGCGGTTTG ATCGAGATTT ACTCCAAAAC GATCGCCGAC ATGCAATACG ACGATTGTCA GGGCCATCCC ATGTGGTTCG AAAAAATCGA ACGCTCGCAT GGCGGGCCGG GATCGCAGCG CTGGCCGCTG CACTTACAGT CCGTCCACCC TGATTTCCGT CTGCATTCCC AACTGTGCGA GTCGGAAACG CTGCGTCAGC AATATGCCGT TGGCGGCAAG GAGCCGGTCT TTATTAACCC ACAGGATGCC AGCGCGCGCG GGATCCGCAA CGGTGACATC GTGCGGGTAT TCAATGCACG CGGGCAGGTA CTGGCGGGAG CGGTAGTTTC CGATCGCTAT GCGCCGGGCG TGGCGCGAAT TCATGAAGGC GCCTGGTACG ATCCTGATAA AGGCGGCGAT CTCAACGCGT TATGTAAGTA CGGCAACCCT AACGTATTAA CACTGGATAT CGGTACATCA CAGCTCGCGC AGGCGACCAG CGCGCATACG ACGCTGGTGG AAATTGAAAA ATATACCGGC CCTATGGATA ACGTCACGGC GTTTAACGGT CCGGTCGAGA TGGTCGCGCA GTGTGAATAT GTACCCGCAT CGCAGGGGAA TCCGCATGAT TAA
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Protein sequence | MKNKDALHVS RRRFLAQLGG LTVAGMLGPS LLTPRSARAA DAVAPGAATK EGILTGSHWG AIRATVVDGR FVAAKPFEQD KYPSKMIAGL PDHVHNAARI RYPMVRVDWM RKGHQSDTSQ RGDNRFVRVS WDEALDLFYQ ELERVQKTYG PSALLTASGW QSTGMFHNAS GMLARAIALH GNSVSTGGDY STGAAQVILP RVVGSMEVYE QQTSWPLVLQ NSKTIVLWGS DMVKNQQANW WCPDHDVYQY YEQLKEKVAS GAISVISIDP VVTSTHDYLG RDKVKHIAIN PQTDVPLQLA LAHTLYSEKL YDKNFLDNYC VGFDQFLPYL LGEKDGQPKD AAWAEKLCGI DADTIRALAR QMAGDRTQII AGWCVQRMQH GEQWSWMVVV LAAMLGQIGL PGGGFGFGWH YNGAGTPGRK GIILSGFSGS TTVPPVHDST DYKGYSSTIP IARFMDAILE PGKDINWNGK SVKLPPLKMC VFAGTNPFHR HQQINRIIEG WRKLETVIAI DNQWTSTCRF ADIVLPATTQ FERNDLDQFG NHSNRGIIAM KQVVSPQFEA RNDFDIFRDL CRRFNREAAF TEGLDEMGWL KRIWQEGSQQ GKGRGIHLPT FEVFWNQQEY IEFDHPQMFV RHQAFREDPD LEPLGTPSGL IEIYSKTIAD MQYDDCQGHP MWFEKIERSH GGPGSQRWPL HLQSVHPDFR LHSQLCESET LRQQYAVGGK EPVFINPQDA SARGIRNGDI VRVFNARGQV LAGAVVSDRY APGVARIHEG AWYDPDKGGD LNALCKYGNP NVLTLDIGTS QLAQATSAHT TLVEIEKYTG PMDNVTAFNG PVEMVAQCEY VPASQGNPHD
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