Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4005 |
Symbol | |
ID | 6874347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3848706 |
End bp | 3850004 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642786959 |
Product | inner membrane transport protein YhaO |
Protein accession | YP_002217587 |
Protein GI | 198241854 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGACG ACACATTACC ATTAAATAAC AGTAACGCTA CGACCACACC GCTTTCAACG AGATTACCGT TTACAAAATA TGATTTTGGC TGGGTGCTCT TGTGTATCGG TATGGCGATC GGCGCAGGTA CCGTCTTAAT GCCAGTGCAA ATCGGTCTCA AGGGGATCTG GGTATTTATT ACCGCTTTTA TCATCGCCTA TCCCGCTACC TATATTGTGC AGGATATTTA TCTAAAAACG TTATCTGAAA GCGAAACCTG TGACGATTAT ACGGATATTA TCAGTCACTA TCTTGGCAAA AACTGGGGCA TTTTTCTCGG TGTAATCTAT TTTCTTATGA TTATCCACGG GGTGTTTATT TATTCCCTGT CGGTGGTGTT TGATAGCGCC TCCTATATCA AAACCTTCGG CCTTACTGAG GTCGATCTTT CGCAGTCTAT TATCTATAAA GTCGCGATTT TCGCCGTGCT GGTGGCGATT GCCTCCGGCG GGGAAAAGTT ATTATTTAAA ATTTCCGGCC CGATGGTGGT GGTAAAAGTC GGGATCATTC TGATATTCGG TTTCGCTATG ATCCCACACT GGAATCTTGA TAATATTTCC GCCTTTCCCG CCGCATCGGT TTTCTTTCGC GACGTACTGC TCACTATCCC ATTTTGCTTC TTTTCTGCGG TCTTCATTCA GGTGCTAAAC CCAATGAACA TCGCCTATCG TAAGCGCGAG CCTGACCGTG TGCTGGCCAC CCGGATGGCG ATTCGCACGC ATCGCATTAG CTATATTACG CTGATTGCCA TTATTCTCTT TTTCTCGTTC TCGTTTACCT TTTCGATTAG CCATGAAGAG GCGGTATCAG CGTTCGAGCA GAATATTTCC GCCCTTGCGC TGGCAGCTCA GGTAATCCCT GGCCATATCA TCCACATTAC CTCTACCATC CTCAATATTT TTGCCGTACT TACCGCGTTC TTTGGTATTT ATTTAGGTTT TCACGAAGCG CTTAAAGGTA TTGTACTGAA TGTATTGAGT CGTATTATGG ATGTCAAAAA CGTCAACCCA CTGTTACTGA CATCTGGTAT CTGTGTCTTT ATCGTGGTTA CTCTGGTTAT CTGGGTTTCG TTTCGCGTCT CAGTATTGGT CTTTTTCCAG TTAGGCAGTC CGCTTTATGG CATTGTCGCG TGTATTATTC CTTTTTTCCT GATTTATAAA GTAGCGCAAC TGGAAAAATT ACGCGGCCTG AAAACCTGGC TTATTCTGTT ATATGGAATA TTGTTGTGCC TGTCGCCGTT ATTAAAATTG ATTGAATAA
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Protein sequence | MQDDTLPLNN SNATTTPLST RLPFTKYDFG WVLLCIGMAI GAGTVLMPVQ IGLKGIWVFI TAFIIAYPAT YIVQDIYLKT LSESETCDDY TDIISHYLGK NWGIFLGVIY FLMIIHGVFI YSLSVVFDSA SYIKTFGLTE VDLSQSIIYK VAIFAVLVAI ASGGEKLLFK ISGPMVVVKV GIILIFGFAM IPHWNLDNIS AFPAASVFFR DVLLTIPFCF FSAVFIQVLN PMNIAYRKRE PDRVLATRMA IRTHRISYIT LIAIILFFSF SFTFSISHEE AVSAFEQNIS ALALAAQVIP GHIIHITSTI LNIFAVLTAF FGIYLGFHEA LKGIVLNVLS RIMDVKNVNP LLLTSGICVF IVVTLVIWVS FRVSVLVFFQ LGSPLYGIVA CIIPFFLIYK VAQLEKLRGL KTWLILLYGI LLCLSPLLKL IE
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