Gene SeD_A3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3976 
Symbol 
ID6875636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3813151 
End bp3814125 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content50% 
IMG OID642786933 
Productsugar isomerase 
Protein accessionYP_002217561 
Protein GI198245634 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2222] Predicted phosphosugar isomerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATGA AAGAGACAGT TAGCAATATT GTGACCAGCC AGGCAGAGAA AGGAGGCATT 
AAACACGTCT ATTATGTGGC GTGCGGCGGT TCTTATGCGG CGTTCTATCC GGCGAAAGCA 
TTTTTAGAAA AAGAAGCGAA AGCGTTGACT GTCGGTCTGT ATAACAGCGG AGAATTTATT 
AACAACCCGC CGGTAGCGCT GGGAGAAAAT GCCGTTGTGG TTGTCGCCTC CCACAAAGGT 
AATACGCCAG AGACAATTAA AGCGGCTGAA ATCGCCCGTC AGCACGGCGC GCCGGTCATT 
GGTTTAACCT GGGTAATGGA TTCACCGTTG GTGGCGCATT GCGACTATGT GGAAACGTAC 
ACGTTTGGCG ACGGTAAAGA TATTGCCGGA GAGAAAACGA TGAAAGGCCT GCTGAGTGCG 
GTCGAACTGC TCCAGCAGAC GGAAGGGTAT GCGCACTACG ACGATTTTCA GGATGGCGTC 
AGCAAAATCA ACCGTATCGT CTGGCGCGCT TGCGAGCAGG TAGCGGAGCG TGCGCAGGCG 
TTCGCGCAGG AATATAAAGA CGATAAAGTC ATTTACACCG TCGCCAGTGG CGCGGGCTAT 
GGCGCAGCCT ACCTACAGAG CATCTGTATC TTTATGGAAA TGCAATGGAT ACATTCCGCC 
TGTATTCATA GCGGTGAGTT TTTCCACGGG CCGTTTGAAA TTACCGATGC GAATACGCCT 
TTCTTATTCC AGTTTTCCGA GGGCAATACG CGGGCGGTGG ATGAACGCGC GTTAAACTTC 
CTGAAAAAAT ATGGCCGCCG GATTGAAGTT GTCGATGCGA AAGAACTGGG GCTATCGACC 
ATTAAAACCA CGGTTATTGA TTACTTTAAC CACTCTCTCT TTAATAACGT TTATCCCGTT 
TACAATCGGG CGTTAGCTGA GGCGCGTCAG CATCCGTTAA CGACGCGCCG CTATATGTGG 
AAAGTGGAAT ATTAA
 
Protein sequence
MGMKETVSNI VTSQAEKGGI KHVYYVACGG SYAAFYPAKA FLEKEAKALT VGLYNSGEFI 
NNPPVALGEN AVVVVASHKG NTPETIKAAE IARQHGAPVI GLTWVMDSPL VAHCDYVETY 
TFGDGKDIAG EKTMKGLLSA VELLQQTEGY AHYDDFQDGV SKINRIVWRA CEQVAERAQA 
FAQEYKDDKV IYTVASGAGY GAAYLQSICI FMEMQWIHSA CIHSGEFFHG PFEITDANTP 
FLFQFSEGNT RAVDERALNF LKKYGRRIEV VDAKELGLST IKTTVIDYFN HSLFNNVYPV 
YNRALAEARQ HPLTTRRYMW KVEY