Gene SeD_A3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3922 
Symbolggt 
ID6875601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3760215 
End bp3761957 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content55% 
IMG OID642786881 
Productgamma-glutamyltranspeptidase 
Protein accessionYP_002217509 
Protein GI198244704 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0405] Gamma-glutamyltransferase 
TIGRFAM ID[TIGR00066] gamma-glutamyltranspeptidase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.610979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAA CGTTTATGCG CTGGGTGGCG ATCGCCGCTC TGCTGGCCGG GGGGACGTTT 
AGCGCGGTGG CCAATCCTCC CGTCGCGCCG CCAGTCTCCT ATGGTGTTGA AGAAGATGTC
TTTCATCCTG TGCGGGCGAC GCAAGGGATG GTGGCGTCCG TGGATGCAAT GGCGACGCAG
GTTGGCGTGG ATATCTTAAA GCAGGGCGGT AATGCCGTGG ATGCCGCCGT CGCCGTGGGC
TATGCGCTGG CTGTGACGCA TCCGCAAGCC GGGAATCTGG GCGGCGGGGG ATTTATGCTG
CTGCGCACCA AAGACGGTAA CACTACGGCG ATTGATTTTC GTGAAATGGC GCCGGCTGGC
GCGACCCGTG ATATGTTCCT CGACGATCAG GGTAACGCCG ATGCGAAAAA GTCGCTGACG
TCGCATCTGG CATCCGGTAC ACCGGGTACC GTGGCGGGGT TCTCGCTGGC GCTGGAGAAA
TACGGCACGA TGCCGCTGAA TAAAGTGGTG CGTCCGGCGA TGAAGCTGGC GGAAGAGGGT
TTTGTGGTTA ACGATGCGCT GGCCGACGAC TTAAAAACTT ACGGCAGCGA AGTGATCCCC
AACCATGAGA ACAGCAAAGC CATTTTCTGG AAAGACGGCG AGCCGCTGAA AAAAGGCGAT
AAGCTGGTCC AGAAGAATCT GGCGAAAAGC CTGGAAATGA TTGCCGAAAA CGGCCCGGAT
GCGTTTTATA AAGGGGCGAT TGCTGACCAG ATTGCCGGAG AAATGCAGAA GAACGGCGGT
CTGATGATCA AAGAGGATTT AGCCAGCTAT AAAGCCGTTG AGCGTACGCC AATCAGCGGT
GACTATCGCG GGTATCAGGT CTTCTCCATG CCGCCGCCAT CCTCGGGCGG TATTCACATC
GTACAGATCC TTAATATTCT TGAAAATTTC GACATGAAGA AGTACGGCTT TGGCAGCGCC
GATGCCATGC AAATCATGGT GGAAGCGGAA AAATACGCCT ACGCTGACCG CTCAGAGTAT
CTGGGCGATC CGGACTTTGT GAAAGTGCCG TGGCAGGCGC TGACCCACAA AGCCTATGCG
AAAACGCTGG CCGATCAAAT TGATATCAAC AAGGCCAAAC CTTCCAGCCA GATAAAACCG
GGCAAGCTCG CCCCGTATGA AAGCAACCAG ACCACCCACT TCTCGGTGGT GGATAAAGAC
GGCAATGCCG TGGCGGTGAC CTATACCCTG AACACCACCT TCGGCACAGG AATTGTGGCG
GGAAATACCG GTATTCTGCT GAATAATCAA ATGGATGATT TTTCTGCTAA ACCCGGTGTA
CCTAATGTTT ATGGCCTGGT GGGCGGCGAT GCTAACGCGG TCGGTCCGAA GAAGCGTCCG
CTGTCGTCGA TGTCGCCCAC TATTGTGGTA AAAGATGGCA AAACCTGGCT GGTGACCGGC
AGTCCTGGCG GGAGTCGAAT CATCACTACC GTGCCGCAAA TGGTAGTGAA CAGCATTGAT
TTTGGCATGA ACGTCGCCGA AGCGACCAAC GCGCCGCGTT TCCATCATCA ATGGTTGCCG
GACGAACTGC GGGTAGAAAA GGGCTTCAGT CCCGATACGC TGAAGTTGCT GGAACAGAAA
GGGCAGAAAG TGGCGCTGAA AGAAGCGATG GGCAGCACCC AAAGTATTAT GGTTGGACCG
GATGGTGAAC TGTATGGCGC TTCCGACCCG CGTTCGGTGG ATGATTTAAC GGCGGGATAC
TGA
 
Protein sequence
MKPTFMRWVA IAALLAGGTF SAVANPPVAP PVSYGVEEDV FHPVRATQGM VASVDAMATQ 
VGVDILKQGG NAVDAAVAVG YALAVTHPQA GNLGGGGFML LRTKDGNTTA IDFREMAPAG
ATRDMFLDDQ GNADAKKSLT SHLASGTPGT VAGFSLALEK YGTMPLNKVV RPAMKLAEEG
FVVNDALADD LKTYGSEVIP NHENSKAIFW KDGEPLKKGD KLVQKNLAKS LEMIAENGPD
AFYKGAIADQ IAGEMQKNGG LMIKEDLASY KAVERTPISG DYRGYQVFSM PPPSSGGIHI
VQILNILENF DMKKYGFGSA DAMQIMVEAE KYAYADRSEY LGDPDFVKVP WQALTHKAYA
KTLADQIDIN KAKPSSQIKP GKLAPYESNQ TTHFSVVDKD GNAVAVTYTL NTTFGTGIVA
GNTGILLNNQ MDDFSAKPGV PNVYGLVGGD ANAVGPKKRP LSSMSPTIVV KDGKTWLVTG
SPGGSRIITT VPQMVVNSID FGMNVAEATN APRFHHQWLP DELRVEKGFS PDTLKLLEQK
GQKVALKEAM GSTQSIMVGP DGELYGASDP RSVDDLTAGY