Gene SeD_A3809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3809 
Symbol 
ID6875742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3637709 
End bp3638176 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content53% 
IMG OID642786776 
Producttype III leader peptidase 
Protein accessionYP_002217404 
Protein GI198241870 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00060894 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTTG CCCTCCCCTT TCTCATTTTT TATGCGTCGT TCTCTTTATT ACTTGGCATA 
TACGACGCGC GTACCGGTCT GTTGCCTGAC CGGTTTACCT GTCCATTACT GTGGGGTGGT
CTGCTTTATC ACCAGATTTG CCTGCCGGAG CGTTTACCGG ATGCGCTTTG GGGTGCTATC
GCCGGCTATG GCGGATTCGC GTTAATTTAC TGGGGCTATC GCCTGCGTTA TCAGAAAGAG
GGGCTTGGAT ATGGCGACGT CAAGTACCTC GCTGCCTTAG GGGCGTGGCA TTGTTGGGAA
ACACTGCCGT TACTGGTTTT CCTTGCCGCC ATGTTGGCCT GTGGCAGGTT TGGCGTCGCG
CTACTGGTGA GAGGTAAATC GGCATTAATA AACCCGCTAC CTTTTGGGCC ATGGCTGGCG
GTGGCGGGTT TCATAACAGG TTGGAAAGTT TTCTTTCCAG ACGGTTAA
 
Protein sequence
MFVALPFLIF YASFSLLLGI YDARTGLLPD RFTCPLLWGG LLYHQICLPE RLPDALWGAI 
AGYGGFALIY WGYRLRYQKE GLGYGDVKYL AALGAWHCWE TLPLLVFLAA MLACGRFGVA
LLVRGKSALI NPLPFGPWLA VAGFITGWKV FFPDG