Gene SeD_A3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3706 
Symbol 
ID6874459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3554378 
End bp3555502 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content55% 
IMG OID642786681 
ProductAFG1 family ATPase 
Protein accessionYP_002217315 
Protein GI198244515 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00969037 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCC TTTCCCCTAC ATCGCGTTAT CTCCAGGCAC TCAACGAAGG CACCCATCAG 
CCTGACGACG TACAGAAAGA GGCGGTCGAC CGTCTGGAAA CCCTTTATCA GGCGCTCACC 
GCGAAAAAAT CGTCGGCTAC GCCACCCGGC GGACTGATAG CGCGACTGGG GAAATTATTA 
GGCAAAAACG AACCGGACGC GCAAATACCG GTTCGCGGGC TGTATATGTG GGGGGGCGTG 
GGTCGCGGCA AAACCTGGCT CATGGATCTC TTCTACCACA GCCTGCCGGG TGAGCGAAAA 
TTACGCCTGC ATTTTCATCG GTTTATGCTG CGCGTGCATG AAGAACTTAC CGCGCTACAG 
GGACAGATCG ATCCGTTAGA CATTATTGCC GATCGGTTTA AAACCGAGAC GGACGTACTG 
TGTTTCGATG AGTTTTTCGT CACCGATATT ACCGACGCCA TGCTGCTGGG CGGTTTAATG 
AAAGCGCTGT TTGCACGCGG CATTACGCTG GTCGCGACCT CCAATATTCC GCCGGATGAA 
CTCTACCGCA ACGGTTTGCA ACGCGCCCGC TTCCTGCCGG CTATCGATGC CATTAAACAG 
CACTGCGACA TTATGAATGT GGACGCCGGC GTCGATTACC GGCTGCGGAC GCTGACGCAG 
GCCCATTTAT GGCTAACGCC GCTTAATGAT GAAACCCGGC GGCAAATGGA TAAACTGTGG 
CTGGCGTTAG CGGGGGCCGC GCGCGAGCAC GCTCCGACGC TGGAAATCAA TCATCGCTCT 
TTATCCACCC TGGGCGTTGA AAACCAAACG CTAGCGGTCT CTTTCGCTAC GCTGTGCGTC 
GAGGCCCGCA GCCAGCATGA TTACATTGCG CTCTCAAGGT TATTTCACAC GGTTCTGCTG 
TTTGACGTGC CGGTCATGAC GCCGCTGATG GAGAACGAAG CGCGCCGCTT TATTGCGCTG 
GTGGATGAGT TTTACGAGCG CCACGTTAAG CTGGTGGTCA GCGCCGCCGC ACCGTTATAT 
GAAATTTATC AGGGGGAACA GCTCAAGTTT GAATTTCAGC GCTGTCTGTC ACGCCTGCAA 
GAGATGCAGA GTGCGGAGTA CCTCAAGCGG GAGCATATGC CGTAA
 
Protein sequence
MQSLSPTSRY LQALNEGTHQ PDDVQKEAVD RLETLYQALT AKKSSATPPG GLIARLGKLL 
GKNEPDAQIP VRGLYMWGGV GRGKTWLMDL FYHSLPGERK LRLHFHRFML RVHEELTALQ 
GQIDPLDIIA DRFKTETDVL CFDEFFVTDI TDAMLLGGLM KALFARGITL VATSNIPPDE 
LYRNGLQRAR FLPAIDAIKQ HCDIMNVDAG VDYRLRTLTQ AHLWLTPLND ETRRQMDKLW 
LALAGAAREH APTLEINHRS LSTLGVENQT LAVSFATLCV EARSQHDYIA LSRLFHTVLL 
FDVPVMTPLM ENEARRFIAL VDEFYERHVK LVVSAAAPLY EIYQGEQLKF EFQRCLSRLQ 
EMQSAEYLKR EHMP