| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3675 |
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| Symbol | kdsC |
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| ID | 6874190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 3522803 |
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| End bp | 3523369 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642786653 |
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| Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
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| Protein accession | YP_002217287 |
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| Protein GI | 198243715 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.308473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.0877894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAG CAGGTGCGTC GCTTGCGACC TGTTATGGCC CCGTCAGCAC CCATGTCATG
ACCAAAGCGG AGAATATCCG CCTGCTCATC CTGGACGTGG ATGGCGTATT GTCTGACGGC
CTGATTTATA TGGGCAATAA CGGCGAAGAG CTGAAGGCTT TCAACGTTCG TGACGGCTAT
GGTATTCGCT GTGCTTTGAC CTCCAATATC GAGGTTGCCA TTATTACCGG ACGAAAGGCT
AAACTTGTAG AAGATCGCTG CGCCACGCTG GGGATTGTCC ATCTTTATCA GGGACAGTCG
AATAAGCTGA TCGCCTTTAG CGATCTGCTG GAAAAACTGG CCATTGCGCC GGAAAATGTT
GCCTATGTCG GCGATGATCT GATTGACTGG CCAGTGATGG AAAAAGTGGG GTTAAGCGTT
GCCGTTGCGG ATGCGCATCC GCTGCTGATC CCCCGCGCTG ACTATGTGAC GCACATTGCC
GGCGGGCGCG GCGCGGTACG TGAGGTGTGC GACTTGTTGC TGCTGGCGCA GGGCAAGCTG
GATGAGGCCA AAGGGCAATC GATATGA
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| Protein sequence | MSKAGASLAT CYGPVSTHVM TKAENIRLLI LDVDGVLSDG LIYMGNNGEE LKAFNVRDGY
GIRCALTSNI EVAIITGRKA KLVEDRCATL GIVHLYQGQS NKLIAFSDLL EKLAIAPENV
AYVGDDLIDW PVMEKVGLSV AVADAHPLLI PRADYVTHIA GGRGAVREVC DLLLLAQGKL
DEAKGQSI
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