Gene SeD_A3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3578 
Symbol 
ID6874120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3436625 
End bp3437122 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content53% 
IMG OID642786566 
Producthypothetical protein 
Protein accessionYP_002217202 
Protein GI198245364 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.146008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAC TAACTTACCT TCAGGGGTAT CCGGAACATC TCCTTGCCCA GGTGCGCGCC 
TTAATCGCCG AGCAGCGCCT GGGAGCAGTG CTGGAAAAAC GTTATCCCGG CGCGCATGAT 
TACGCTACTG ACAAAGCGCT ATATCACTAT ACTCAGGAAC TGAAAAGTCA GTTTCTGCGC 
AATGCGCCGC CCATCAATAA AGTGATGTAT GACAGCAAGA TCCATGTGCT GAAAAATGCG 
CTGGGACTGC ATACCGCTGT CTCGCGCGTT CAGGGCGGCA AGCTCAAGGC AAAGGCGGAG 
ATCCGCGTCG CCACCGTGTT TCGCAACGCC CCGGAGCCAT TCTTACGGAT GATTGTGGTT 
CACGAACTGG CACACCTGAA AGAGAAAGAT CATAACAAAG CGTTTTATCA GCTCTGCTGC 
CATATGGAAC CGCAGTACCA TCAACTGGAG TTTGATACGC GACTGTGGCT GACGCATCAG 
GCGCTGTCGG CACAATAA
 
Protein sequence
MTSLTYLQGY PEHLLAQVRA LIAEQRLGAV LEKRYPGAHD YATDKALYHY TQELKSQFLR 
NAPPINKVMY DSKIHVLKNA LGLHTAVSRV QGGKLKAKAE IRVATVFRNA PEPFLRMIVV 
HELAHLKEKD HNKAFYQLCC HMEPQYHQLE FDTRLWLTHQ ALSAQ