Gene SeD_A3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3553 
Symbol 
ID6874777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3406832 
End bp3407452 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content53% 
IMG OID642786542 
Productinner membrane protein YqiJ 
Protein accessionYP_002217179 
Protein GI198242556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.100268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTAT TTGCGGAGTA TAACAGCCCC TATCTGTTTG CCATCGCGTT CGTTTTCTTT 
ATCGGCGTGC TGGAGATGAT TTCGCTGATT TTTGGCCACT TTCTTTCAGG CGCGCTCGAC 
GCCCATCTCG ATCATTATGA CGCCCTGTCA TCCGGCCCTG CGGGCCAGGC GCTTCATTAT 
CTGAATATTG GACGCGTTCC CGCCCTGGTC GTCCTCTGTC TATTGGCCGG TTATTTCGGC 
CTCTTCGGTA TCCTCATCCA GCATGGCGGG ATCATGCTCT GGCAAGCGCC GCTCAGCAAT 
CTGCTGCTGG TCCCGTTGAG CATTGTCCTG TCGGTCTTTG CCGTGCATTA CAGCGGAAAA 
ATCCTCGCGC CCTGGCTACC CAGAGATGAA AGCTCCGCCC TCCGGGAAGA GGAATTTATC 
GGCGGCATGG CGATTATTAC CGGCCACGCC GCCGTCGCCG GTACACCTTG CGAAGGAAAA 
TTTACCGATA AGTTCGGCCA GATTCACTAT TTACTGCTGG AACCCGAAAA GGGAAAAGAA 
TTTAAAAAAG GAGACAAGGT GCTGATTGTC TGCCGACTTT CCGCAACGCG TTATTTGGCT 
GAGCGTACCT TCTATGTTTA A
 
Protein sequence
MTLFAEYNSP YLFAIAFVFF IGVLEMISLI FGHFLSGALD AHLDHYDALS SGPAGQALHY 
LNIGRVPALV VLCLLAGYFG LFGILIQHGG IMLWQAPLSN LLLVPLSIVL SVFAVHYSGK 
ILAPWLPRDE SSALREEEFI GGMAIITGHA AVAGTPCEGK FTDKFGQIHY LLLEPEKGKE 
FKKGDKVLIV CRLSATRYLA ERTFYV