Gene SeD_A3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3473 
Symbol 
ID6874938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3334571 
End bp3335872 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content49% 
IMG OID642786467 
Producttyramine oxidase 
Protein accessionYP_002217104 
Protein GI198245037 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAA AAATCGATGC GTTGAATTAC TACGGCGCGA CGAAAAAATA CCCGTTGCAT 
TTTCCTGCTC TGCAAGACGA TATTGATGCC GATGTGGTGA TCATTGGCGG TGGCTTTTCA 
GGCATCAATA CCGCGCTGGA ACTGGCGGAG CAGGGGATCA CTAATGTTGT CGTTCTGGAA 
GCCCGCCATC TTGGGTATGG CGGCACCGGG CGAAACGGCG GTCAGGTGAT GGCCGGTATA 
GGTCACGACA TCGAAGCCGT TAAAAAATAT GTAGGCGCAG CGGGAATGGA GACGCTGTTT 
AAAATCTCGA ACCTCGGCGC AGGTATTATT CGGGAGCGAA TTCGTAAATA CCATATTGAT 
GCTGATTTTG TCCCCGGATA TGGTTATCTG GCCTACAACC AGCGGCAGTT AAAAACGCTG 
CAACAATGGG AAAAAGAATT CAAAGCTGCT ACGCCGGAAG ATGATATTGA ACTCTATACC 
GGTAAAGACG TGCAGCAGGT TATTGGTTCC GACGTCTACT GCGGTGTTCT CAAGCATATG 
GGGGGAGGGC ATGTCCACTC GCTGAATTTA TTGCTGGGCT CCGCTCAGGC TGCGAATTCG 
CTGGGGGTGA AGATATTCGA ATATTCACCT GTGGTTGAGG TCAGTTACGG TAAAACTGTG 
CGGGTACGTA CTGCGATGGG CAGCGTAAAA GCAGCCAAAT TGCTGTGGGC CTGTGATAGT 
TTTCTCAATA ATCTGGAACC AGAAATTTAT AAGAAAACGC TGGTTACTTA TTCTTATCAG 
GTCTCTACAG AACCTCTCTC CAGCGAGCTT GTTGAGCGGA TCAGTCCCTT GCGCGGGGCT 
TTTAGCGATA TCCGCCCGGT GATAAATTAC TACCGTCTCA CAAAAGAAAA CCGTCTGCTG 
TTTGGCAGCG CCACAAGGTT TCTTGAATAT ACCCCGCACG ATTTTGCTGC CTGGAACCGC 
ACTCTGTTGA CGGAGGTCTT CCCTTATTTG AAAGACGTTA AAATCGATTT TGCCTGGGGC 
GGACCGATGG CCTGTAGCGC GAATCTGTTT CCGCAGATTG GCACGCTTCG TGAACACAAT 
AATGTTTTTT ATGTTCAGGG TTATTCCGGA TTTGGCGTCA CGCCTTCCCA TATTGTATGC 
AAAATCCTGG CCGAAGGAAT AAATGGCGGT TCCGAGCGGT ATCGTCTGAT GAGTAGCATT 
CCCCACGCGA CAATTTATGG TCGCGACAGT CTACGTCTAT TGCTGGTCAG TGCGGGAAAA 
CTGATACATC AAACAGCCGG TTTCTGGAAA GGCCGGAATT AA
 
Protein sequence
MNTKIDALNY YGATKKYPLH FPALQDDIDA DVVIIGGGFS GINTALELAE QGITNVVVLE 
ARHLGYGGTG RNGGQVMAGI GHDIEAVKKY VGAAGMETLF KISNLGAGII RERIRKYHID 
ADFVPGYGYL AYNQRQLKTL QQWEKEFKAA TPEDDIELYT GKDVQQVIGS DVYCGVLKHM 
GGGHVHSLNL LLGSAQAANS LGVKIFEYSP VVEVSYGKTV RVRTAMGSVK AAKLLWACDS 
FLNNLEPEIY KKTLVTYSYQ VSTEPLSSEL VERISPLRGA FSDIRPVINY YRLTKENRLL 
FGSATRFLEY TPHDFAAWNR TLLTEVFPYL KDVKIDFAWG GPMACSANLF PQIGTLREHN 
NVFYVQGYSG FGVTPSHIVC KILAEGINGG SERYRLMSSI PHATIYGRDS LRLLLVSAGK 
LIHQTAGFWK GRN