Gene SeD_A3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3455 
SymbolmltC 
ID6874903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3317214 
End bp3318299 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content52% 
IMG OID642786449 
Productmurein transglycosylase C 
Protein accessionYP_002217087 
Protein GI198244824 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.941292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA AATTACTCGC GCTTGCTGTT ATTGCGCCGT TGCTCATCTC CTGCTCCAGT 
TCGACCAAAA AAGGCGAGAC GTATAATGAA GCCTGGGTCA AGGATACCAA CGGCTTTGAT
ATTTTGATGG GGCAATTTGC CAACAATATT GAAAATCTGT GGGGATATAA GGAAGTCCTG
ATCGCCGGGC CGAAAGACTA CGTCAAATAT ACCGATCAGT TCCAGACCCG TAGCCACATC
AACTTTGATG ATGGGACCAT TACCGTTGAA ACCATCGCCG GGACGGAACC TACCGCACAT
CTGCGCCGGG CCATTATTAA AACGTTGCTC ATGGGTGACG ACCCAACCTC CGTCGATCTT
TACTCCGATG TCGATGACAT AAAAATTTCT AAAGAACCCT TCCTGTATGG TCAGGTCCTC
GACAATACCG GCCAGCCTAT TCGCTGGGAA GGCCGCGCCA CGACATTCGC GGATTACTTG
CTGAAAACGC GGCTCAAAAG CCGCAGTAAC GGCCTGCGTA TTATTTACAG CGTCACCATT
AATCTGGTGC CGAACCACCT TGATAAACGC GCGCATAAAT ACATTGGCAT GGTACGCCAG
GCCTCCCGTA AATACGGCGT TGACGAGTCG CTGATTCTGG CGATTATGCA AACGGAGTCC
TCGTTTAACC CGTATGCGGT CAGCCATGCG GATGCGCTGG GCCTGATGCA GGTAGTGCAA
CACAGCGCCG GGAAAGATGT TTTCCGTTCT CAGGGTAAGT CCGGCACGCC AAGCCGTAAC
TTCCTGTTCG ACCCCGCCAG CAATATCGAT ACCGGCACAG CGTATCTGGC AATGTTGAAT
AATGTCTATC TGAGCGGTAT CGAGAATCCG ACGTCGCGGC GCTATGCGGT CATTACCGCC
TACAATGGCG GCGCAGGCAG CGTATTACGC GTATTCTCGA ACGATAAGAT TCAGGCCGCG
AATATGATTA ACCGCATGTC GCCGGGGGAT GTGTACCAGA TATTAACCAC CCGACATCCA
TCTGCGGAGT CGCGCCGCTA TCTGTATAAG GTGAATTCCG CCCAGCGATC GTATCGCCGC
CGATAA
 
Protein sequence
MMKKLLALAV IAPLLISCSS STKKGETYNE AWVKDTNGFD ILMGQFANNI ENLWGYKEVL 
IAGPKDYVKY TDQFQTRSHI NFDDGTITVE TIAGTEPTAH LRRAIIKTLL MGDDPTSVDL
YSDVDDIKIS KEPFLYGQVL DNTGQPIRWE GRATTFADYL LKTRLKSRSN GLRIIYSVTI
NLVPNHLDKR AHKYIGMVRQ ASRKYGVDES LILAIMQTES SFNPYAVSHA DALGLMQVVQ
HSAGKDVFRS QGKSGTPSRN FLFDPASNID TGTAYLAMLN NVYLSGIENP TSRRYAVITA
YNGGAGSVLR VFSNDKIQAA NMINRMSPGD VYQILTTRHP SAESRRYLYK VNSAQRSYRR
R