| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3442 |
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| Symbol | |
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| ID | 6871205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3307006 |
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| End bp | 3307986 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642786436 |
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| Product | twitching motility protein PilT |
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| Protein accession | YP_002217074 |
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| Protein GI | 198245091 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.091783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATGG AAGAAATTGT GACGCTTAGT GTAAAGCATA ACGTCTCGGA TCTACACCTG
TGTAACGCCT GGCCTGCGCG ATGGCGCAAA CAAGGACGCA TGGAGAACGC GCCTTTTACC
GCGCCTGATG TCGACAGGCT TCTGCTTGAT TGGCTTAATG ATGCGCAACA ATATCAGTGG
CGAACGCACG GCCAGCTTGA TTTCGCCGTC TCGCTGTCTG GCACGCGGCG CCTGCGCGCC
AGTGCGTTCA CACATCAACA GGGAACGTCG CTGGCGCTAC GGCTATTGCC CGAGCGTTGT
CCTGATCTGG CGGAAATCCA GACGCCGCCG ATAGTACCCG CACTGCTTGC CAGCGAGAAC
GGACTGATTC TGGTCACTGG CGCTACTGGC TGCGGGAAAT CCACTACGCT GGCGGCGATG
GTGGGACATC TTAATCAACA TGCCGATAAA CACATCCTGA CGCTGGAAGA TCCTATTGAG
TACCGTTACA CCAGCAAGCG TTGCCTGATA CAGCAGCGGG AAATCGGCCA GCATTGCGCC
ACTTTTGCCG CCGGGCTGCG CGCGGCGTTA CGTGAAGATC CCGATGTCAT TTTACTGGGA
GAGCTGCGTG ACAGCGAGAC CATTCGCCTG GCGCTGACGG CGGCGGAAAC GGGGCATCTG
GTACTGGCAA CCCTGCATAC TCGCGGTGCG GCGCAGGCGG TGGAAAGATT AGTGGATAGT
TTTCCGGCGC AGGAAAAAGA ACCGGTACGC AGTCAACTGG CGGGTAGTCT GCGCGCTGTA
CTATCGCAAA AACTGGAGGT CGACAGACAG GATGGGCGCG TGGCGTTGTT TGAATTACTG
ATTAATACGC CAGCCACAGG GAATTTGATC CGTGAAGGCA AACTCCATCA GTTGGCCCAC
GTGATACAAA CCGGGCAGCA GCAGGGGATG ATGACATTCG CCCAGAGCGC GCAATGGCGT
CAGGTGCAGG GACGGCTGTA G
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| Protein sequence | MNMEEIVTLS VKHNVSDLHL CNAWPARWRK QGRMENAPFT APDVDRLLLD WLNDAQQYQW
RTHGQLDFAV SLSGTRRLRA SAFTHQQGTS LALRLLPERC PDLAEIQTPP IVPALLASEN
GLILVTGATG CGKSTTLAAM VGHLNQHADK HILTLEDPIE YRYTSKRCLI QQREIGQHCA
TFAAGLRAAL REDPDVILLG ELRDSETIRL ALTAAETGHL VLATLHTRGA AQAVERLVDS
FPAQEKEPVR SQLAGSLRAV LSQKLEVDRQ DGRVALFELL INTPATGNLI REGKLHQLAH
VIQTGQQQGM MTFAQSAQWR QVQGRL
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