Gene SeD_A3429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3429 
Symbol 
ID6874268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3295108 
End bp3295839 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content48% 
IMG OID642786423 
Productputative outer membrane lipoprotein 
Protein accessionYP_002217061 
Protein GI198245174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.00148857 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAAAT TTAAATTTAA TGCCGTCATT GTTGGCTTGT TTTTGCTGTT AGGCGGTTGT 
TCCAGCGGAA TGCAATCTAA TAATGGCTCT TCATCCGACG TCGGCACCGC CTGGGGCGGC 
GACGTGCATT CATCGGTACA AAGCGTTTCG GTAGAACGTG CCGATCGAGA ACCTGCCGAA 
ATGGTGATAA TAAATTACTC CACTCAATAT CCGTCAGGTT ACGATAAAGT TTATAGTATA 
CGTATCAGCG ATCTTGAATA TGCTGTGCGC GACGCTAATT TTAATTCGAT TCCAATTACT 
CGTCGCTACA ACGCATCAAT GGGACAATGG CAATATAGTA TTCCTGCAAG ATCAGGGATG 
AACTATCAGT TATATATTCG TAATTACAGT CATGATACCA ATTACGAAAT CGTCGCAACG 
GTTGATGGCC TGGACGTGTT GAACGGAAAA GCAGGCTCGC TGAATCATCA TGGCTATATT 
GTTAACGCCG GCGATTCACT GGCGATTAAA GGGTTTCGCA AAGATAAACA CACTGAGGCG 
GCATTCCAGT TCGCCGACGT AGCTGACGCT TATGCGGCCC ACTCCGCGCA GGGCGATGTA 
CGCAACATCG GCGTCATCGG CTTTGCCGCT TTTGCATTGC AGGGTAAAGC AACAAATACG 
CTACCGCCTT GTTCCTCGCA GGCTTTCCCG GCGGACAACA ACGGGTATGC GCCGCCGCCC 
TGCCGCAAAT AA
 
Protein sequence
MSKFKFNAVI VGLFLLLGGC SSGMQSNNGS SSDVGTAWGG DVHSSVQSVS VERADREPAE 
MVIINYSTQY PSGYDKVYSI RISDLEYAVR DANFNSIPIT RRYNASMGQW QYSIPARSGM 
NYQLYIRNYS HDTNYEIVAT VDGLDVLNGK AGSLNHHGYI VNAGDSLAIK GFRKDKHTEA 
AFQFADVADA YAAHSAQGDV RNIGVIGFAA FALQGKATNT LPPCSSQAFP ADNNGYAPPP 
CRK