Gene SeD_A3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3417 
Symbol 
ID6873745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3282786 
End bp3283442 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content58% 
IMG OID642786415 
Productputative cobalt ABC transporter ATPase 
Protein accessionYP_002217053 
Protein GI198243625 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1118] ABC-type sulfate/molybdate transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.0943741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACGT TAAATCAGGT CGCTTATCGC TGGCCGGATG CCGCAGCCGA CTGTTTGCAC 
GCTATCTCGC TTGAACTTCG TGACGGCGAA TGGCTGGCGT TGACCGGCGA TAACGGCGCG
GGAAAATCAA CACTGTTACG GATTATGGCC GGCCTGCTTT CCCCCACTTC CGGCTCGGTA
ACGCTTAATG GAGAGCCGAT TGCGCAGCTT AAAAATCGTC AACGCGCCGC CGCTATCGGC
GTACTCTTTC AGGAAGCGGA AAACCAGATT TTCCACAGCA ATGTCGCGCA AGAGGTCGCT
TTTGGGCTGA AACTACAACG CTTATCGGCA GAGGAAATTT CACGGCGCAC GCAGGCCGCG
CTGCGGTTAT GCCAGCTAAC GGACGTCGCC GAGGCGCACC CGCTTGATCT GCACGCCGCA
CCGCGCCGGA TGGTGGCGGT CGCCAGTCTG GAGGCGATGG CGCCGCCTGT GTTATTGCTG
GATGAACCCA GCCGGGATTT TGACGCCCAC TGGCTAACCG TATTTGAACA CTGGCTGGCG
ACATGCCGGG CACGGGGAAC CAGCGTCGTG GCGATTAGCC ATGACGCTGC GTTTACCCGG
CGTCATTTTT CACGGGTGGT ACGGCTGGAA AACGGCAGGT TGTCAAAGGG AGAATAA
 
Protein sequence
MLTLNQVAYR WPDAAADCLH AISLELRDGE WLALTGDNGA GKSTLLRIMA GLLSPTSGSV 
TLNGEPIAQL KNRQRAAAIG VLFQEAENQI FHSNVAQEVA FGLKLQRLSA EEISRRTQAA
LRLCQLTDVA EAHPLDLHAA PRRMVAVASL EAMAPPVLLL DEPSRDFDAH WLTVFEHWLA
TCRARGTSVV AISHDAAFTR RHFSRVVRLE NGRLSKGE