Gene SeD_A3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3416 
Symbol 
ID6874837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3282115 
End bp3282792 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content56% 
IMG OID642786414 
ProductABC transporter ATP-binding protein 
Protein accessionYP_002217052 
Protein GI198244366 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.120331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACGT TAGAGCAGTT TCGTTATCTT CCGTCCGATG CGACACGCCC GCCGGCATGT 
TTTGATTTCC ACTATTCAAC ACCCGGAATA GTGGCGATAG TCGGCGATAA CGGCAGCGGA
AAAAGTACGC TGGCGCAACT GATGGCTGGC TGGTATCCGG ATTATCTTCC CGGTGATATT
GACGGCACAG GCTTACTGCT TGGCGTCCCT ATCGGGCAGC TCCCGCTGGT AGAACAGTCG
CCCACCATCC AGTTGGTGCA GCAATCGCCT TATTTACAGC TTTCCGGCTG TACCTTTAGC
GTAGAGGAAG AGGTGGCGTT TGGCCCGGAG AATCTCGGCC TCCATGAAGC GGAAATTCTA
CGGCGCATTG ACGAGGCGCT GACTCTGACA AACTGCCAGT CGTTACGCCA TCGCCATCCC
GGCACGCTCT CCGGCGGCGA AACGCAGCGG GTAGTGATTG CCAGCGCGCT TGCCATGCAG
CCCAGGCTAT TAGTTCTTGA TGAAACCTTC AGTCGGCTGA CGTCAGCGGC CACCGGGATG
CTGCTGGAAC GGCTACAACA GTGGGCGCTG GAACGTCATT CTCTCATTGT GCTTTTTGAG
CGTAACCATT TTCCTTTTCT GACGCGATGC CAGCGGGTAT GGCAATTGCG CGACGGAGCG
CTAACCCCAT TATGTTGA
 
Protein sequence
MVTLEQFRYL PSDATRPPAC FDFHYSTPGI VAIVGDNGSG KSTLAQLMAG WYPDYLPGDI 
DGTGLLLGVP IGQLPLVEQS PTIQLVQQSP YLQLSGCTFS VEEEVAFGPE NLGLHEAEIL
RRIDEALTLT NCQSLRHRHP GTLSGGETQR VVIASALAMQ PRLLVLDETF SRLTSAATGM
LLERLQQWAL ERHSLIVLFE RNHFPFLTRC QRVWQLRDGA LTPLC