Gene SeD_A3394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3394 
Symbol 
ID6874049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3264223 
End bp3265425 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content58% 
IMG OID642786397 
Producthypothetical protein 
Protein accessionYP_002217035 
Protein GI198242450 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.626262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAAGTG TTGATGTAGC AATAGTTGGC GGAGGCATGG TGGGACTGGC TGTCGCCTGC 
GGCTTGCAGG GGAGCGGTTT GCGCGTTGCG GTACTGGATC ACGTTGTCCC CCAGCCGTTG
GCGAACGATG CGTCGCCTCA GCTTCGGGTG TCGGCGATTA ATGCCGCCAG CGAAAAACTG
CTTACCCGTC TTGGCGTATG GTCAAACATT GTGGCGCGAC GGGCAAGTTG CTACCACGGT
ATGGAAGTCT GGGATAAAGA CAGCTTTGGC CGTATTACGT TTGATGACGC AAGCATGGGA
TATAGCCATC TGGGGCATAT TGTTGAAAAC AGCGTCATTC ACTACGCATT GTGGCAAAAA
GCGCAGCAAG CGGCGGATAT CACCTTAATG GCGCCAGCGG AGTTACAGCA GGTCGCCTGG
GGGGAGAACG ACGCCTTCCT GACTTTAAAA GACGGCGCGA TGTTAACCGC GCGTCTGGTG
ATTGCCGCGG ATGGCGCCAA CTCCTGGCTG CGTAACAAAG CGGATATTCC CTTAACTTTC
TGGGACTACC GTCACCATGC GCTGGTAGCG ACTATCCGCA CCGAAGAGCC GCACGGCGCG
GTTGCTCGCC AGGTGTTTCA TGGTGAAGGT ATTCTGGCGT TTTTGCCGTT AAGCGATCCG
CATCTGTGTT CCATTGTCTG GTCGCTTTCT CCGCAGGATG CGGAGCGTAT GCAACAGAGC
GGCGACGAGG CGTTTAACCA GGCGTTGACT ATCGCCTTCG ATAATCGGCT GGGCTTATGC
CGCCTGGAAA GCGAACGGCA GGTTTTTCCG CTGACGGGCC GCTATGCTCG CCAGTTTGCC
GCGCATCGTC TGGCGTTGGT CGGCGATGCC GCGCACACCA TCCATCCGCT GGCAGGGCAG
GGCGTCAACC TCGGCTTTAT GGACGCGGCC GAACTGGTGG ACGATCTGCG CCGGCTTCAG
CGCCAGGGCA AAGACATTGG CCAACATCTT TATCTCCGTC GTTATGAGCG TAGCCGTAAA
CATAGCGCGG CGATGATGCT TGCCGGGATG CAAGGTTTTC GTGACCTGTT TGCCGGCGAA
AACCCGGCAA AAAAATTGCT GCGCGACATC GGGCTGAAAC TGGCGGATAC GCTCCCCGGC
GTCAAACCCC AACTGCTTCG CCAGGCAATG GGGCTAAACG ACCTTCCGCA ATGGCTTCGT
TAA
 
Protein sequence
MQSVDVAIVG GGMVGLAVAC GLQGSGLRVA VLDHVVPQPL ANDASPQLRV SAINAASEKL 
LTRLGVWSNI VARRASCYHG MEVWDKDSFG RITFDDASMG YSHLGHIVEN SVIHYALWQK
AQQAADITLM APAELQQVAW GENDAFLTLK DGAMLTARLV IAADGANSWL RNKADIPLTF
WDYRHHALVA TIRTEEPHGA VARQVFHGEG ILAFLPLSDP HLCSIVWSLS PQDAERMQQS
GDEAFNQALT IAFDNRLGLC RLESERQVFP LTGRYARQFA AHRLALVGDA AHTIHPLAGQ
GVNLGFMDAA ELVDDLRRLQ RQGKDIGQHL YLRRYERSRK HSAAMMLAGM QGFRDLFAGE
NPAKKLLRDI GLKLADTLPG VKPQLLRQAM GLNDLPQWLR