Gene SeD_A3248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3248 
Symbolcas2 
ID6871369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3121348 
End bp3121641 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content49% 
IMG OID642786263 
Producthypothetical protein 
Protein accessionYP_002216904 
Protein GI198243922 
COG category 
COG ID 
TIGRFAM ID[TIGR01873] CRISPR-associated endoribonuclease Cas2, E. coli subfamily 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.271107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.862142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATGG TGGTTGTGGT CACGGAAAAC GTACCGCCGC GCCTGCGGGG ACGTCTTGCC 
GTCTGGTTAC TTGAGGTTCG TGCAGGTGTT TATGTTGGCG ATACCTCGAA GCGTATTCGG 
GAAATGATTT GGCAACAGAT CACACAGCTT GGCGGAGTCG GAAACGTAGT AATGGCCTGG 
GCAACAAATA CTGAGTCTGG TTTTGAGTTC CAGACCTGGG GTGAAAACAG ACGTATTCCG 
GTAGATTTGG ATGGACTGCG TTTGGTTTCT TTTCTTCCTG TTGAAAATCA ATAA
 
Protein sequence
MSMVVVVTEN VPPRLRGRLA VWLLEVRAGV YVGDTSKRIR EMIWQQITQL GGVGNVVMAW 
ATNTESGFEF QTWGENRRIP VDLDGLRLVS FLPVENQ