Gene SeD_A3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3226 
Symbol 
ID6871527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3103938 
End bp3105200 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content59% 
IMG OID642786242 
ProductYgbK domain-containing protein 
Protein accessionYP_002216883 
Protein GI198246033 
COG category[S] Function unknown 
COG ID[COG3395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.474263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAA TTGGCGTCAT TGCCGACGAT TTTACCGGCG CGACTGACAT CGCCAGTTTT 
CTGGTCGAAA ACGGGATGCC GACAGTGCAG ATCAATGATG TCCCAACCGG GACGCAACCG 
GAAGGGTGCG ACGCGGTGGT TATCAGCCTG AAAACCCGCT CATGCCCGGC GCAAGAGGCG 
ATAAAACAAT CGCTGGCGGC GCTGGTATGG CTGAAAAAAC AGGGCTGCCA GCAAGTCTAT 
TTCAAATATT GCTCGACTTT CGATAGTACC GCCGAAGGCA ATATCGGCCC GGTCACCGAT 
GCGCTGATGG TGGCGCTGGA TACCTCATTT ACCGTGATTT CTCCCGCGCT GCCGGTTAAC 
GGACGCACGG TTTATCAGGG CTATCTGTTT GTCATGAACC ACTTGCTGGC GGAGTCCGGT 
ATGCGCCACC ACCCAATCAA TCCGATGACC GACAGCTACC TGCCGCGTCT GATGGAAGCG 
CAGGCGCAAG GGCGCTGCGG CGTTATTCCA GCTCAGACGC TTGATGAAGG CGTTGCCGCG 
ACCCGTGCGG CGCTGTCGCG TTTACAGCAG GAAGGATATC GCTACGCAGT ACTTGACGCG 
CTCAATGAGC GGCACCTGGA AATCCAGGGC GAGGTTTTGC GTGATGCTCC GCTGGTGACC 
GGCGGTTCCG GGCTGGCAAT GGGGCTGGCG CGTCAGTGGG CGAAGCACGG CGTTTCTCAG 
GCCCGTTCCG CAGGCTATCC GCTGAGCGGC CGCGCGGTGG TGCTTTCCGG TTCCTGTTCG 
CAAATGACGA ATCAGCAGGT GGCTTTCTAT CGACAACATG CTCCCACACG CGACGTTGAT 
GTGGCGCGCT GCCTGTCATC CGAGACGCGC GAGGCCTACG CTGAAGCGCT GGCGCAGTGG 
GTGCTCAGTC AGGACAGCGA ACTGGCGCCA ATGATTAGCG CCACCGCCTC CACGCAGGCG 
CTGGCCGCCA TCCAGCAGCA ATATGGCGCT ACCGAAGCCA GCCATGCGGT AGAGGCGCTC 
TTTTCCCTGC TGGCTGCTCG CTTAGCGGAA GGCGGTATCA CCCGGTTTAT TGTGGCGGGC 
GGCGAAACCT CGGGCGTGGT GACGCAAAGC CTCGGTATTA CCGGTTTTCA CATCGGACCG 
TGCATTTCAC CCGGCGTGCC GTGGGTCAAC GCGCTCCATG CGCCAGTCTC GCTGGCGCTA 
AAGTCAGGTA ATTTTGGCGA TGAATCCTTT TTCATCCGCG CTCAAAGGGA GTTTCAGGTA 
TGA
 
Protein sequence
MLKIGVIADD FTGATDIASF LVENGMPTVQ INDVPTGTQP EGCDAVVISL KTRSCPAQEA 
IKQSLAALVW LKKQGCQQVY FKYCSTFDST AEGNIGPVTD ALMVALDTSF TVISPALPVN 
GRTVYQGYLF VMNHLLAESG MRHHPINPMT DSYLPRLMEA QAQGRCGVIP AQTLDEGVAA 
TRAALSRLQQ EGYRYAVLDA LNERHLEIQG EVLRDAPLVT GGSGLAMGLA RQWAKHGVSQ 
ARSAGYPLSG RAVVLSGSCS QMTNQQVAFY RQHAPTRDVD VARCLSSETR EAYAEALAQW 
VLSQDSELAP MISATASTQA LAAIQQQYGA TEASHAVEAL FSLLAARLAE GGITRFIVAG 
GETSGVVTQS LGITGFHIGP CISPGVPWVN ALHAPVSLAL KSGNFGDESF FIRAQREFQV