Gene SeD_A3183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3183 
SymboleprI 
ID6872685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3060466 
End bp3060708 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content46% 
IMG OID642786203 
Producttype III secretion apparatus needle protein 
Protein accessionYP_002216844 
Protein GI198244137 
COG category 
COG ID 
TIGRFAM ID[TIGR02105] type III secretion apparatus needle protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.587699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAC CTTGGTCAGG CTATCTGGAT GACGTCTCAG CAAAATTTGA TACGGGCGTT 
GATAATCTAC AAACGCAGGT AACAGAGGCG CTGGATAAAT TAGCAGCAAA ACCCTCCGAT 
CCGGCGCTAC TGGCGGCGTA TCAGAGTAAG CTCTCGGAAT ATAACTTGTA CCGTAACGCG 
CAATCGAACA CGGTAAAAGT CTTTAAGGAT ATTGATGCTG CCATTATTCA GAACTTCCGT 
TAA
 
Protein sequence
MATPWSGYLD DVSAKFDTGV DNLQTQVTEA LDKLAAKPSD PALLAAYQSK LSEYNLYRNA 
QSNTVKVFKD IDAAIIQNFR