Gene SeD_A3112 details

Gene Information

• Locus tag: SeD_A3112
• Symbol: nrdI
• ID: 6872194
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: +
• Start bp: 2996760
• End bp: 2997170
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 642786136
• Product: ribonucleotide reductase stimulatory protein
• Protein accession: YP_002216782
• Protein GI: 198243545
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG1780] Protein involved in ribonucleotide reduction
• TIGRFAM ID: [TIGR00333] ribonucleoside-diphosphate reductase 2, operon protein nrdI

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.639432
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 61
• Fosmid unclonability p-value: 0.48077
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGCGC TCGTCTACTT CTCCAGCAGC TCTGAAAATA CGCACCGCTT TATGCAGCGT 
CTGGGGCTGC CTGCCACGCG TATTCCGCTC AATGAGCGGG AGCGAATTCG GGTAGACGAA 
CCGTACATTC TGGTTGTGCC GTCATACGGC GGCGGCGGGA TGGCCGGTGC GGTGCCGCGA 
CAGGTGATCC GCTTTTTAAA TGATGAACAC AACCGGGCGC GCATTCGCGG CGTCATTGCC 
TCCGGTAATC GCAATTTCGG CGATGCCTGG GGATGCGCTG GCGATGTGAT AGCACAAAAA 
TGCGGCGTAC CCTGGCTGTA CCGCTTTGAG CTCATGGGCA CACAACGCGA CATCGATAAC 
GTCCGAAAAG GAGTAAATGA ATTTTGGCAA CAACTATCCC GGAGCGCGTA A 

 

Protein sequence

MSALVYFSSS SENTHRFMQR LGLPATRIPL NERERIRVDE PYILVVPSYG GGGMAGAVPR 
QVIRFLNDEH NRARIRGVIA SGNRNFGDAW GCAGDVIAQK CGVPWLYRFE LMGTQRDIDN 
VRKGVNEFWQ QLSRSA