Gene SeD_A3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3080 
Symbol 
ID6875404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2974289 
End bp2975185 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content41% 
IMG OID642786108 
ProductMig-14 
Protein accessionYP_002216754 
Protein GI198244247 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5653] Protein involved in cellulose biosynthesis (CelD) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATAC AAGAAGTTAA GCGTATATTA ACCCGCTGGC AGCCGTCTTC CTTTACCCTA 
TACCGGGAGG TGTTTACGCA ATACGGCGGT AGTATCAATA TGCACCCAGA TATTGTTGAT 
TATTTTATGA AGCGCCATAA CTGGCATTTT AAATTCTTCC ACTATAAAGA AGATGATAAG 
ATTAAAGGCG CCTACTTTAT CTGTAATGAT CAGAATATTG GCATCCTGAC GCGCAGAACC 
TTCCCGCTAT CGTCAGATGA GATACTTATT CCAATGGCAC CAGATTTACG CTGCTTCTTA 
CCCGATCGTA CTAACCGACT TTCGGCGTTG CATCAGCCAC AAATACGCAA TGCCATATGG 
AAACTCGCCA GAAAGAAACA AAATTGTCTG GTCAAAGAAA CGTTCTCTTC TAAGTTTGAA 
AAAACACGCC GTAATGAATA TCAGCGATTT CTTAAAAAAG GCGGAAGTGT AAAAAGCGTT 
GCTGATTGTT CTTCTGATGA ACTGACTCAT ATTTTTATCG AGTTATTTCG GTCTCGTTTC 
GGCAATACTT CATCCTGCTA TCCCGCTGAT AACCTTGCCA ACTTTTTTAG TCAACTGCAT 
CACCTTCTGT TTGGGCATAT TCTTTATATT GAAGGGATAC CCTGTGCATT TGATATCGTA 
TTGAAATCTG AAAGCCAGAT GAACGTCTAC TTTGACGTAT CTAATGGTGC AATTAAAAAT 
GAGTTCAGAC CACTCAGTCC CGGCAGCATA CTAATGTGGC TAAATATTAA CCGTGCCAGA 
CATTACTGCC AGGAAAGACA AAAAAAATTG CTTTTTTCCA TCGGCATACT AAAGCCTGAA 
TGGGAATATA AGCGCATGTG GTCGACCCCC TATTTTACCG GAAAATCGAT TTGCTAA
 
Protein sequence
MKIQEVKRIL TRWQPSSFTL YREVFTQYGG SINMHPDIVD YFMKRHNWHF KFFHYKEDDK 
IKGAYFICND QNIGILTRRT FPLSSDEILI PMAPDLRCFL PDRTNRLSAL HQPQIRNAIW 
KLARKKQNCL VKETFSSKFE KTRRNEYQRF LKKGGSVKSV ADCSSDELTH IFIELFRSRF 
GNTSSCYPAD NLANFFSQLH HLLFGHILYI EGIPCAFDIV LKSESQMNVY FDVSNGAIKN 
EFRPLSPGSI LMWLNINRAR HYCQERQKKL LFSIGILKPE WEYKRMWSTP YFTGKSIC