Gene SeD_A3058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3058 
Symbol 
ID6874982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2950874 
End bp2951731 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content46% 
IMG OID642786088 
Productretron adenine methylase 
Protein accessionYP_002216734 
Protein GI198242501 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID[TIGR00571] DNA adenine methylase (dam) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.99248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA TCCTGAAATG GGCGGGTAAT AAAACTACCA TTATGTCCGA ACTGAAAAAA 
CATCTTCCTG CTGGCCCGCG ACTGGTTGAA CCTTTCGCGG GTTCCTGTGC TGTGATGATG
GAGACGGATT ACCCCAGTTA TCTTGTTGCG GATATTAATC CTGATTTAAT CAACCTCTAT
AAAAAGGTTG CTGCTGATTG TGAATCGTTT ATATCTCGCG CCAGAGTTTT ATTTGAGATC
GCAAACAGGG AGGTGGCTTA TTACAACATA AGGCAGGAGT TTAATTACTC AACTGAAATT
ACTGATTTCA TGAAAGCGGT ATATTTCCTG TATCTCAATC GTCACGGTTA CCGTGGTTTA
TGTCGCTATA ACAAGAGCGG GCATTTCAAC ATTCCCTACG GTAATTATAA AAATCCGTAT
TTCCCTGAAA AAGAAATTCG CGCATTTGCA GAAAAGGCCC AGCGAGCAAC GTTTATCTGC
GCCAGCTTTG ATGAAACGCT GGCGATGTTG AAGGCGGGGG ATGTGGTGTA TTGCGATCCG
CCGTATGACG GTACGTTTTC CGGCTATCAC ACTGATGGTT TCACTGAAGA TGACCAGTAT
CACCTAGCAT CCGTTCTTGA ACATCGGTCA TCAGAAGGAC ATCCGGTCAT TGTTTCTAAC
AGTGACACAT CCCTGATCCG TTCGCTGTAT CGCAATTTTA CTCACCACTA CATCAAGGCA
AAACGCAGCA TCGGCGTAGC AGCTGGTGAG AGTAAATCTG CAACAGAAAT CATCGCTGTT
TCTGGGGCAC GCTGCTGGGT GGGATTTGAT CCTTCGCGTG GCGTGGATAG TTCTGCCGTG
TACGGAGTGC GTGCATGA
 
Protein sequence
MSTILKWAGN KTTIMSELKK HLPAGPRLVE PFAGSCAVMM ETDYPSYLVA DINPDLINLY 
KKVAADCESF ISRARVLFEI ANREVAYYNI RQEFNYSTEI TDFMKAVYFL YLNRHGYRGL
CRYNKSGHFN IPYGNYKNPY FPEKEIRAFA EKAQRATFIC ASFDETLAML KAGDVVYCDP
PYDGTFSGYH TDGFTEDDQY HLASVLEHRS SEGHPVIVSN SDTSLIRSLY RNFTHHYIKA
KRSIGVAAGE SKSATEIIAV SGARCWVGFD PSRGVDSSAV YGVRA