Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3058 |
Symbol | |
ID | 6874982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2950874 |
End bp | 2951731 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642786088 |
Product | retron adenine methylase |
Protein accession | YP_002216734 |
Protein GI | 198242501 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0338] Site-specific DNA methylase |
TIGRFAM ID | [TIGR00571] DNA adenine methylase (dam) |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.99248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA TCCTGAAATG GGCGGGTAAT AAAACTACCA TTATGTCCGA ACTGAAAAAA CATCTTCCTG CTGGCCCGCG ACTGGTTGAA CCTTTCGCGG GTTCCTGTGC TGTGATGATG GAGACGGATT ACCCCAGTTA TCTTGTTGCG GATATTAATC CTGATTTAAT CAACCTCTAT AAAAAGGTTG CTGCTGATTG TGAATCGTTT ATATCTCGCG CCAGAGTTTT ATTTGAGATC GCAAACAGGG AGGTGGCTTA TTACAACATA AGGCAGGAGT TTAATTACTC AACTGAAATT ACTGATTTCA TGAAAGCGGT ATATTTCCTG TATCTCAATC GTCACGGTTA CCGTGGTTTA TGTCGCTATA ACAAGAGCGG GCATTTCAAC ATTCCCTACG GTAATTATAA AAATCCGTAT TTCCCTGAAA AAGAAATTCG CGCATTTGCA GAAAAGGCCC AGCGAGCAAC GTTTATCTGC GCCAGCTTTG ATGAAACGCT GGCGATGTTG AAGGCGGGGG ATGTGGTGTA TTGCGATCCG CCGTATGACG GTACGTTTTC CGGCTATCAC ACTGATGGTT TCACTGAAGA TGACCAGTAT CACCTAGCAT CCGTTCTTGA ACATCGGTCA TCAGAAGGAC ATCCGGTCAT TGTTTCTAAC AGTGACACAT CCCTGATCCG TTCGCTGTAT CGCAATTTTA CTCACCACTA CATCAAGGCA AAACGCAGCA TCGGCGTAGC AGCTGGTGAG AGTAAATCTG CAACAGAAAT CATCGCTGTT TCTGGGGCAC GCTGCTGGGT GGGATTTGAT CCTTCGCGTG GCGTGGATAG TTCTGCCGTG TACGGAGTGC GTGCATGA
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Protein sequence | MSTILKWAGN KTTIMSELKK HLPAGPRLVE PFAGSCAVMM ETDYPSYLVA DINPDLINLY KKVAADCESF ISRARVLFEI ANREVAYYNI RQEFNYSTEI TDFMKAVYFL YLNRHGYRGL CRYNKSGHFN IPYGNYKNPY FPEKEIRAFA EKAQRATFIC ASFDETLAML KAGDVVYCDP PYDGTFSGYH TDGFTEDDQY HLASVLEHRS SEGHPVIVSN SDTSLIRSLY RNFTHHYIKA KRSIGVAAGE SKSATEIIAV SGARCWVGFD PSRGVDSSAV YGVRA
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