Gene SeD_A3049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3049 
Symbol 
ID6875227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2940645 
End bp2941478 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content56% 
IMG OID642786079 
Productphage capsid scaffolding protein 
Protein accessionYP_002216725 
Protein GI198244230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.00184125 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGTGA AAGCAAAGCG TTTTCGCATC GGGGTGGAAG GTGCCACCAC CGACGGACGC 
GAAATCCAGC GTGAATGGCT GGAACAGATG GCAGCCAGCT ACAACCCGGC GGTGTACACC 
GCGCTGATTA ACCTTGAGCA CATCAAGTCT TATCTGCCGG ACAGCACCTT TAACCGCTAC 
GGCAAGGTAA CGGCGCTGTT TGCTGAAGAA ATCACGGAAG GTCCGCTGGC AGGCAAGATG 
GCATTGTATG CCGACGTTGA GCCAACGGAG TCCCTGGTGG AACTGGTGAA AAAAGGCCAG 
AAATTATTCA CCTCTATGGA AGTCAGCCCG AAGTTCGCTG ATACGGGCAA AGCCTACCTG 
GTTGGCCTGG CCGCCACTGA TGATCCCGCC AGTCTGGGTA CGGAAATGCT GACATTCAGC 
GCCAGTGCAG CCCATAACCC GCTGGCAAAC CGCAAGCAGA ATCCCGCCAA TCTTTTTACC 
GCTGCAGAGG AAACGGTGAT CGAACTGGAA GAAGCCCAGG ACGACAAACC GTCCCTGTTT 
GCCCGTGTCA CGGCGCTGTT TACCAAAAAA GAGCAGTCCG ATGACGCCCG GTTCTCTGAT 
ATGCATAAGG CCGTGGAACT GGTCGCCACT GAGCAGCAGA ACCTGAGCGC ACGCACCGAA 
AAATCTTTGT CTGAGCAGGA TGAACGCCTG TCTGAGCTGG AGACTGCCCT GCAGGCACAG 
CAGACCGCCT TTAACGAACT GGTGAATAAG CTGAGTCATG AAGACAGCCG CCAGGACTAC 
CGCCAGCGTG CAACAGGCGG TAACGCCTCC GCTGACACTC TGACCAATTG CTGA
 
Protein sequence
MTVKAKRFRI GVEGATTDGR EIQREWLEQM AASYNPAVYT ALINLEHIKS YLPDSTFNRY 
GKVTALFAEE ITEGPLAGKM ALYADVEPTE SLVELVKKGQ KLFTSMEVSP KFADTGKAYL 
VGLAATDDPA SLGTEMLTFS ASAAHNPLAN RKQNPANLFT AAEETVIELE EAQDDKPSLF 
ARVTALFTKK EQSDDARFSD MHKAVELVAT EQQNLSARTE KSLSEQDERL SELETALQAQ 
QTAFNELVNK LSHEDSRQDY RQRATGGNAS ADTLTNC