Gene SeD_A3041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3041 
Symbol 
ID6874440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2936637 
End bp2937065 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content59% 
IMG OID642786071 
Productphage lysis timing protein LysB 
Protein accessionYP_002216717 
Protein GI198245419 
COG category 
COG ID 
TIGRFAM ID[TIGR03495] phage lysis regulatory protein, LysB family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.00072276 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCGGT TGCTGCTGGT TGTGCTGGCG TTATTACTGG CGTCGCTGGG CTGGCAGACG 
TGGCGGCTGG CTGATGCCAG CCAGACCATC AGCACGCAGG CAGACGAGCT GCGGAGCAAA 
AGTCAGGCAC TGGCAAAGAG CAACAGCCAG CTTATCAGCC TGTCCATTCT GACTGAAACC 
AATAACCGGG AGCAGGCGCG GCTCTATGCC GAAGCAGAAC AGACCAGCGC GCTGCTGAGA 
CAACGACAAC ATCGGATTGA GGAACTGAAA CGTGAGAACG AGGATTTACG CCGCTGGGCT 
GATACTCCTT TGCCTGCTGA CATTATCCGG CTGCGGGAAC GTCCGGCACT CACCGGAGGT 
GCAGCTTACC GTCAGTGGTT GTCCGCGAGT GACGCCGTGT CAGCTGGATC AGGCAGCGCC 
ACACAATAA
 
Protein sequence
MNRLLLVVLA LLLASLGWQT WRLADASQTI STQADELRSK SQALAKSNSQ LISLSILTET 
NNREQARLYA EAEQTSALLR QRQHRIEELK RENEDLRRWA DTPLPADIIR LRERPALTGG 
AAYRQWLSAS DAVSAGSGSA TQ