Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3030 |
Symbol | |
ID | 6871113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2928215 |
End bp | 2928730 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642786060 |
Product | phage major tail tube protein FII |
Protein accession | YP_002216706 |
Protein GI | 198245888 |
COG category | [R] General function prediction only |
COG ID | [COG3498] Phage tail tube protein FII |
TIGRFAM ID | [TIGR01611] phage contractile tail tube protein, P2 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.00222332 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTTTAC CACGCAAGTT AAAACACCTG AACCTGTTCA ACGACGGGAA CAACTGGCAG GGGATCGTTG AGTCTCTGAC CCTGCCGAAA TTTACCCGCA AGTTTGAGAA GTATCGCGGC GGCGGTATGC CGGGCGCAGT GGATGTGGAC ATGGGGCTGG ATGACGGCGC ACTGGACACG GAATTTTCAA TCGGCGGTAC CGAGCTGCTG TTATTCAAGC AGATGGGCAA GGCAACCGTT GACGGCATCC AGCTGCGTTT CACAGGTTCC ATTCAGCGTG ACGATACCGG CGAAGTGCAG GCCGTTGAGC TGGTTGTGCG CGGGCGCCAT AAAGAGGTGG ATTCCGGCGA GTGGAAAACC GGCGAGAGCA GCAGCACCAA AGTCAGCAGT ACCAACAGCT ACGCGAAGCT GACCATTAAT GGTGAGGTGC TCTATGAGGT CGATCTGGTC AACATGGTAG AAATCGTTGG CGGCGTGGAC CTGATGGAAG AACACCGTAA TGCCCTTGGC CTCTGA
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Protein sequence | MALPRKLKHL NLFNDGNNWQ GIVESLTLPK FTRKFEKYRG GGMPGAVDVD MGLDDGALDT EFSIGGTELL LFKQMGKATV DGIQLRFTGS IQRDDTGEVQ AVELVVRGRH KEVDSGEWKT GESSSTKVSS TNSYAKLTIN GEVLYEVDLV NMVEIVGGVD LMEEHRNALG L
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