Gene SeD_A3026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3026 
Symbol 
ID6873868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2924442 
End bp2924927 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content53% 
IMG OID642786057 
Productphage P2 GpU family protein 
Protein accessionYP_002216703 
Protein GI198243853 
COG category[R] General function prediction only 
COG ID[COG3499] Phage protein U 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.00288409 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGATGG TACTGGGTTT ATATGTATTT ATGCTGCGCA CTGTCCCTTA TCAGGAACTG 
CAGTATCAGC GCAGCTGGCG ACACGCCGCC AACAGCCGGG TGAACCGCCG TCCGTCAACG 
CAGTTTCTTG GCCCGGATAA CGATTCACTG ACACTGTCCG GGGTTCTGCT GCCGGAAGTG 
ACTGGCGGCA GACTGTCATT ACTGGCGCTG GAACAAATGG CTGAACTGGG CAAGGCATGG 
CCTTTGATTG AAGGTAGTGG AACCATTTAC GGCATGTTTG TTATTGAGAG TCTGAGCCAG 
ACAAAGACGG AGTTTTTTGC CAGCGGAATG CCCAGGCGCA TTGAGTTTAC GATCACCCTC 
AAACGGGTTG ATGAGTCGCT CTCTGACATG TTCGGGAGCC TGAGTGACCA GCTCAGCAAC 
CTGCAGGACT CCGCAGCATC TGCTATTGGG GGGATTAAAA ACACGGTTGG AGGATTGCTG 
CAGTGA
 
Protein sequence
MMMVLGLYVF MLRTVPYQEL QYQRSWRHAA NSRVNRRPST QFLGPDNDSL TLSGVLLPEV 
TGGRLSLLAL EQMAELGKAW PLIEGSGTIY GMFVIESLSQ TKTEFFASGM PRRIEFTITL 
KRVDESLSDM FGSLSDQLSN LQDSAASAIG GIKNTVGGLL Q