Gene SeD_A2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2973 
Symbol 
ID6873940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2864306 
End bp2864893 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content51% 
IMG OID642786010 
Productneutral amino-acid efflux protein 
Protein accessionYP_002216660 
Protein GI198245047 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCGA TGCTTTTAAG CGCTTTCTGG ACTTATACAT TAATCACCGC CCTTACCCCC 
GGCCCAAACA ATATTCTCGC GCTTAGCGCA GCAACTGCAC ATGGTTTTCG GCAGAGTATT
CGTGTACTGG CAGGTATGAG TCTGGGATTT TTGGTCGTCA TGCTGCTGTG CGCCGGGATC
GCGTTTTCCC TTGCGGTTAT CGATCCGGCA ATCATTCATT TACTCAGTTG GGTGGGGGCT
GCGTATATCC TGTGGCTGGC GTGGAAAATT GCTACCAGTC CAGCGGCGGA TGAGAATGTC
AGACCAAAAC CGGTTGGCTT TTGGGTAAGC TTTGGCCTGC AGTTTGTGAA CGTCAAAATT
ATTCTGTACG GCATTACCGC TCTGTCTACA TTTGTTTTAC CGCAAACGCA GGCGCTGAAC
TGGGTCATCG GCGTCAGTAT ATTGCTGGCA TTGATCGGCA CGTTCGGTAA TGTGTGCTGG
GCGCTGGCGG GACATCTGTT TCAGCGGGCG TTTCGCCATT ATGGTCGCCA GTTAAATATC
ATTCTGGCGT TACTGCTGGT GTACTGCGCG GTGCGGATTT TTTACTGA
 
Protein sequence
MTPMLLSAFW TYTLITALTP GPNNILALSA ATAHGFRQSI RVLAGMSLGF LVVMLLCAGI 
AFSLAVIDPA IIHLLSWVGA AYILWLAWKI ATSPAADENV RPKPVGFWVS FGLQFVNVKI
ILYGITALST FVLPQTQALN WVIGVSILLA LIGTFGNVCW ALAGHLFQRA FRHYGRQLNI
ILALLLVYCA VRIFY