Gene SeD_A2913 details

Gene Information

• Locus tag: SeD_A2913
• Symbol: hscA
• ID: 6875139
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: -
• Start bp: 2805803
• End bp: 2807653
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642785954
• Product: chaperone protein HscA
• Protein accession: YP_002216604
• Protein GI: 198244862
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 92
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCTTAT TACAAATTAG TGAGCCTGGT CTGAGCGCCG CGCCGCATCA GCGTCGTCTG 
GCGGCGGGCA TCGACTTAGG CACTACCAAC TCTCTGGTTG CGACGGTTCG CAGCGGCCAG 
GCGGAAACTC TGCCTGACCA CGAAGGGCGC CACCTGTTGC CTTCAGTGGT TCACTATCAG 
CAGCAGGGCC ATACGGTCGG TTACGCTGCG CGTGACAATG CCGCGCAGGA TACGGCCAAC 
ACTATCAGCT CTGTGAAACG CATGATGGGA CGCTCGCTGG CGGATATCCA GGCGCGCTAT 
CCGCATCTGC CTTACCGGTT TAAGGCAAGC GTTAATGGAC TGCCGATGAT TGACACGGCG 
GCTGGATTGC TCAATCCGGT ACGCGTATCG GCTGATATTC TCAAAGCTCT GGCCGCGCGG 
GCTAGCGAAT CGCTCTCCGG CGAGCTGGAT GGTGTGGTGA TTACCGTTCC CGCCTATTTC 
GATGATGCCC AACGTCAGGG AACGAAAGAC GCCGCGCGGC TGGCAGGCCT GCATGTACTG 
CGCCTGCTCA ACGAACCGAC GGCGGCGGCG ATTGCCTACG GTCTGGACTC AGGCAAAGAA 
GGCGTTATTG CTGTTTACGA TCTCGGCGGC GGTACCTTCG ATATCTCTAT CTTACGCCTG 
AGCCGCGGGG TGTTTGAAGT GCTGGCGACG GGCGGTGATT CTGCGCTCGG CGGCGACGAC 
TTTGACCATC TGCTGGCGGA CTATATTCGC GAGCAGGCGG GAATTGCCGA TCGTAGCGAC 
AATCGCGTTC AGCGCGAATT GCTGGATGCC GCGATTGCCG CGAAAATCGC CTTAAGCGAT 
GCCGATACTG TTCGAGTTAA CGTTGCGGGC TGGCAGGGGG AGATCACTCG CGAGCAGTTT 
AACGATCTCA TTTCCGCGCT GGTTAAGCGC ACGCTATTGG CCTGCCGTCG CGCATTGAAA 
GATGCCGGCG TTGATCCCCA GGACGTTCTG GAAGTGGTCA TGGTCGGCGG TTCGACCCGT 
GTACCGCTGG TGCGTGAGCG GGTGGGCGAA TTTTTTGGCC GCACGCCGTT AACCGCTATT 
GACCCGGATA AAGTGGTCGC TATCGGCGCA GCGATTCAGG CCGATATTCT GGTCGGCAAC 
AAGCCGGACA GCGAAATGTT GCTGTTGGAC GTGATTCCAC TCTCTCTTGG GCTGGAAACG 
ATGGGCGGCC TGGTGGAAAA AGTCATTCCG CGCAACACCA CTATCCCGGT GGCGCGCGCG 
CAGGATTTCA CCACCTTCAA AGACGGCCAG ACCGCGATGT CTATCCATGT GATGCAGGGC 
GAACGCGAAC TGGTGCAGGA CTGCCGCTCG CTGGCGCGCT TTGCGCTGCG CGGGATTCCG 
CCGCTGCCGG CGGGCGGGGC GCATATTCGC GTGACCTTCC AGGTAGACGC CGATGGCCTG 
TTGAGCGTCA CCGCAATGGA AAAATCCACC GGCGTCGAGG CCTCCATTCA GGTCAAACCT 
TCCTATGGCC TGACCGATGG CGAAATCGCC TCGATGATCA AGGATTCCAT GAGTTTTGCC 
GAGCAGGACG TGAAAGCGCG TATGCTGGCG GAGCAAAAAG TCGAAGCCGC GCGCGTGCTG 
GAAAGTTTGA CCGGCGCGCT AACTGCCGAC GCCGCGCTGT TAAGCGCCGC AGAACGTCAA 
TGCATTGATG ATGCCGCCGC ACATTTAAGC GCGGTCGCAC AAGGCGATGA TGTTGACGCC 
ATAGAACAAG CCATTAAAAA CGTAGATAAA CAAACCCAGG AATTTGCCGC TCGCCGCATG 
GACCAGTCGG TTCGTCGCGC GTTGAAAGGC CATTCCGTAG ACGAGGTTTA A 

 

Protein sequence

MALLQISEPG LSAAPHQRRL AAGIDLGTTN SLVATVRSGQ AETLPDHEGR HLLPSVVHYQ 
QQGHTVGYAA RDNAAQDTAN TISSVKRMMG RSLADIQARY PHLPYRFKAS VNGLPMIDTA 
AGLLNPVRVS ADILKALAAR ASESLSGELD GVVITVPAYF DDAQRQGTKD AARLAGLHVL 
RLLNEPTAAA IAYGLDSGKE GVIAVYDLGG GTFDISILRL SRGVFEVLAT GGDSALGGDD 
FDHLLADYIR EQAGIADRSD NRVQRELLDA AIAAKIALSD ADTVRVNVAG WQGEITREQF 
NDLISALVKR TLLACRRALK DAGVDPQDVL EVVMVGGSTR VPLVRERVGE FFGRTPLTAI 
DPDKVVAIGA AIQADILVGN KPDSEMLLLD VIPLSLGLET MGGLVEKVIP RNTTIPVARA 
QDFTTFKDGQ TAMSIHVMQG ERELVQDCRS LARFALRGIP PLPAGGAHIR VTFQVDADGL 
LSVTAMEKST GVEASIQVKP SYGLTDGEIA SMIKDSMSFA EQDVKARMLA EQKVEAARVL 
ESLTGALTAD AALLSAAERQ CIDDAAAHLS AVAQGDDVDA IEQAIKNVDK QTQEFAARRM 
DQSVRRALKG HSVDEV