Gene SeD_A2893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2893 
Symbol 
ID6872687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2785077 
End bp2786081 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content58% 
IMG OID642785937 
Productcytoskeletal protein RodZ 
Protein accessionYP_002216587 
Protein GI198246023 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTG AAGCCACGCA CGACCAAAAT GAAGCACAAA CCACCGGCGT TCGTCTGCGC 
AATGCCCGTG AACAACTCGG ACTCAGCCAG CAGGCTGTCG CTGAGCGACT TTGCCTGAAG 
GTTTCTACGG TACGCGATAT TGAAGAAGAT AAGGCGCCGT CCGATCTTGC TTCAACCTTC 
CTGCGCGGAT ATATCCGCTC ATATGCGCGT CTGGTGCATG TTCCAGAAGA GGAACTGCTG 
CCGGGGCTGG AAAAACAAGC TCCGCTGCGC GCCGCTAAAG TCGCCCCGAT GCAGAGTTTC 
TCATTAGGAA AGCGTCGTAA AAAACGCGAC GGCTGGTTAA TGTCTTTTAC CTGGCTGGTA 
CTGTTTGTGG TCGTAGGGCT GACCGGCGCC TGGTGGTGGC AGAACCACAA GGCGCAGCAG 
GAAGAGATCA CGACGATGGC CGATCAAAGC ACGGCTGAAC TGAACGCAGA TAAAGACAGC 
GGCCAAAGCG TACCGCTGGA CACCGGTGCC GTGACAAGCC AGGATACGAC GCCAGCGCAA 
ACGGCTCCGG CGCCTGCGAC GCCGGTTGAT TCGACGGCGG CGACGCAAAC GCCAGCGCCA 
ACGGCGGCGG CAACGCAAAA TACGGTAGTC GCGCCTTCGC AGGCGAATGT CGATACGGCT 
GCGACATCTG CCGCGCCAGC GGCAACGGAG ACGCCGTCCG CGCTGCCGAC CAGTCAGGCT 
GGCGTAGCGG CGCCTGCTGC CGATCCGAAC GCGCTGGTGA TGAATTTTAC CGCTGACTGC 
TGGCTCGAAG TCACTGACGC CACGGGTAAG AAGCTGTTTA GTGGTATGCA GCGTAAAGAT 
GGTAATTTAA ACCTAACCGG TCAGGCGCCT TATAAACTTA AAATTGGCGC GCCGGCCGCG 
GTGCAGATCC AGTATCAAGG AAAACCTGTC GATCTGAGCC GCTTTATCAG AACTAATCAG 
GTTGCGCGTC TGACCCTTAA TGCCGAACCG ACACCGGCGC AGTAA
 
Protein sequence
MNTEATHDQN EAQTTGVRLR NAREQLGLSQ QAVAERLCLK VSTVRDIEED KAPSDLASTF 
LRGYIRSYAR LVHVPEEELL PGLEKQAPLR AAKVAPMQSF SLGKRRKKRD GWLMSFTWLV 
LFVVVGLTGA WWWQNHKAQQ EEITTMADQS TAELNADKDS GQSVPLDTGA VTSQDTTPAQ 
TAPAPATPVD STAATQTPAP TAAATQNTVV APSQANVDTA ATSAAPAATE TPSALPTSQA 
GVAAPAADPN ALVMNFTADC WLEVTDATGK KLFSGMQRKD GNLNLTGQAP YKLKIGAPAA 
VQIQYQGKPV DLSRFIRTNQ VARLTLNAEP TPAQ