Gene SeD_A2821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2821 
Symbol 
ID6873782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2690304 
End bp2691356 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content54% 
IMG OID642785874 
Producttranscriptional regulator EutR 
Protein accessionYP_002216524 
Protein GI198244204 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA CCCGTACAGC GAATTTGCAC CATCTTTATC ATGAAGCGTT ACCCGAAGAC 
GTTAAACTTA CGCCCAGAGT CGAGGTGGAC AATGTTCATC AGCGACGGAC GACGGATGTC 
TATGAACATG CTCTGACTAT CACCGCCTGG CAGCAGATCT ACGATCAGTT ACACCCGGGT 
AAATTTCATG GCGAGTTCAC GGAAATCCTG CTTGATGAGA TTCAGGTGTT CCGTGAATAC 
ACCGGCCTGG CGCTGCGTCA GTCGTGTCTG GTTTGGCCAA ACTCTTTCTG GTTTGGTATT 
CCGGCGACGC GCGGCGAACA GGGATTTATC GGCGCGCAGG GGCTCGGCAG CGCCGAGATT 
GCCACCCGAC CGGGAGGCAC CGAGTTTGAA CTGAGCACGC CGGATGATTA CACCATTCTG 
GGTGTCGTTA TCTCGGAAGA TGTTATTTCC CGTCAGGCCA CTTTTTTGCA TAACCCGGAA 
AGGGTGCTGC ATATGCTGCG TAACCAGTTA GCGCTGGAGG TAAAAGAGCA GCATAAAGCG 
GCGCTGTGGG GCTTTGTGCA GCAGGCGCTG GCCACCTTCA GCGAGAGTCC TGAAACCCTG 
CATCAACCTG CGGTGCGTAA GGTCTTGAGT GATAATTTGT TGCTGGCGAT GGGCACGATG 
CTGGAAGAGG CGAAGCCGAT TCATAGCGCC GAAAGCATCA GCCATCAGGG ATATCGTAGG 
CTACTGTCGC GGGCGCGGGA ATATGTGCTG GAAAATATGT CGGAGCCGCT GACGGTGCTC 
GACTTATGTA ACCAGCTACA CGTAAGCCGT CGCACGCTGC AAAATGCGTT TCACGTCATT 
TTGGGCATTG GCCCCAATGC GTGGCTGAAA CGTATTCGCT TAAACGCAGT ACGCCGGGAA 
CTGATTAGCC CGTGGTCGCA GAGCGCCACG GTCAAAGATG CCGCGATGCA GTGGGGATTC 
TGGCATCTGG GGCAATTTGC CACCGATTAT CAGCAATTAT TTGCCGAAAA ACCGTCGTTG 
ACGTTGCATC AACGGATGCG GCAATGGGCT TGA
 
Protein sequence
MKKTRTANLH HLYHEALPED VKLTPRVEVD NVHQRRTTDV YEHALTITAW QQIYDQLHPG 
KFHGEFTEIL LDEIQVFREY TGLALRQSCL VWPNSFWFGI PATRGEQGFI GAQGLGSAEI 
ATRPGGTEFE LSTPDDYTIL GVVISEDVIS RQATFLHNPE RVLHMLRNQL ALEVKEQHKA 
ALWGFVQQAL ATFSESPETL HQPAVRKVLS DNLLLAMGTM LEEAKPIHSA ESISHQGYRR 
LLSRAREYVL ENMSEPLTVL DLCNQLHVSR RTLQNAFHVI LGIGPNAWLK RIRLNAVRRE 
LISPWSQSAT VKDAAMQWGF WHLGQFATDY QQLFAEKPSL TLHQRMRQWA