Gene SeD_A2786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2786 
SymbolnupG 
ID6872973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2659791 
End bp2661047 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content49% 
IMG OID642785840 
Productnucleoside permease NupG 
Protein accessionYP_002216490 
Protein GI198245553 
COG category 
COG ID 
TIGRFAM ID[TIGR00889] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.055348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATTA CGTCCCGCTT AAAAGTCATG TCGTTCTTGC AATATTTTAT CTGGGGGAGC 
TGGCTGGTTA CCCTGGGCTC TTACATGATC AACACTCTGG ATTTTACCGG CGCGAATGTC 
GGTATGGTCT ACAGCTCAAA AGGACTGGCA GCGATTATCA TGCCGGGCAT TATGGGGATC 
ATTGCTGATA AATGGCTGCG CGCTGAGCGA GCCTATATGC TTTGCCATCT GGTTTGCGCG 
GGGGCGTTAT TGTACGCCAC CACCGTTACC GATCCCCAGA CGATGTTCTG GGTGATGTTG 
GTTAATGCGA TGGCGTATAT GCCAACGATT GCATTATCCA ATAGCGTTTC GTACTCCTGT 
CTGGCGAAAG CAGGTCAGGA TCCGGTAACG TCATTTCCGC CCGTGCGCGT TTTCGGCACA 
ATAGGTTTTA TTGTTGCGAT GTGGACGGTG AGCCTGATAG GGCTGGAACT GAGCAGTGCG 
CAATTATACA TCGCTTCTGG CGCATCGTTA TTGCTGGCCC TGTATGCGCT GACGTTACCG 
AAAATTCCGG TAGCCGAGAA GAAGGCGAAC ACCACGCTTG TCAGTAAGCT CGGACTGGAT 
GCTTTTGTTC TGTTTAAAAA TCCACGCATG GCAATCTTCT TTTTGTTTGC GATGATGTTG 
GGGGCGGTGC TGCAAATTAC CAATGTCTTC GGTAATCCAT TCCTGCATGA TTTTGCCCGT 
AATCCTGAGT TTGCCGACAG CTTTGTGGTG AGGTATCCCT CTATCTTGCT TTCAGTTTCG 
CAGATGGCGG AAGTGGGCTT TATCCTCACC ATTCCGTTTT TCCTTAAACG CTTTGGTATT 
AAAACAGTAA TGCTGATGAG CATGCTGGCG TGGACGCTGC GTTTCGGCTT CTTTGCCTTT 
GGCGATCCAT CCCCGTTTGG CTTTGTGCTA CTGCTGCTGT CGATGATTGT TTATGGCTGC 
GCATTTGATT TCTTCAACAT CTCAGGGTCA GTATTTGTAG AGCAGGAGGT GGACTCAAGT 
ATTCGCGCCA GCGCGCAGGG GCTATTTATG ACCATGGTTA ACGGCGTGGG GGCGTGGATT 
GGGTCTCTTT TAAGCGGTAT GGCCGTGGAT TATTTTTCTA TTGATGGTGT AAAAGATTGG 
CAAACCATTT GGCTGGTTTT TGCCGCCTAC GCTCTGGCAT TGGCCGTTAT TTTTGCATTG 
TTCTTTAAAT ATCAGCACCA TCCAGAAAAA CTGTCGACCA AATCATTAGC ACATTAA
 
Protein sequence
MGITSRLKVM SFLQYFIWGS WLVTLGSYMI NTLDFTGANV GMVYSSKGLA AIIMPGIMGI 
IADKWLRAER AYMLCHLVCA GALLYATTVT DPQTMFWVML VNAMAYMPTI ALSNSVSYSC 
LAKAGQDPVT SFPPVRVFGT IGFIVAMWTV SLIGLELSSA QLYIASGASL LLALYALTLP 
KIPVAEKKAN TTLVSKLGLD AFVLFKNPRM AIFFLFAMML GAVLQITNVF GNPFLHDFAR 
NPEFADSFVV RYPSILLSVS QMAEVGFILT IPFFLKRFGI KTVMLMSMLA WTLRFGFFAF 
GDPSPFGFVL LLLSMIVYGC AFDFFNISGS VFVEQEVDSS IRASAQGLFM TMVNGVGAWI 
GSLLSGMAVD YFSIDGVKDW QTIWLVFAAY ALALAVIFAL FFKYQHHPEK LSTKSLAH