Gene SeD_A2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2720 
Symbol 
ID6875478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2602437 
End bp2603450 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content58% 
IMG OID642785785 
Productputative semialdehyde dehydrogenase 
Protein accessionYP_002216442 
Protein GI198244778 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.970694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAG GCTGGAACAT TGCCATTCTG GGCGCAACGG GCGCCGTAGG CGAAGCCCTG 
CTTGAAACAC TGGCTGAACG CCAGTTCCCG GTCGGTGAAA TTTATGCGTT GGCGCGTCAT
GAAAGCGCGG GCGAGCACCT CCGTTTTGGT GGCAAGTCGG TCATTGTCCA GGATGCGGCG
GACTTTGACT GGACGCAGGC GCAGTTGGCG TTTTTCGTTG CCGGCGCAGA GGCATCGGCT
GCCTGGATAG ACGACGCGAC TAATGCAGGT TGCCTGGTGA TAGATTCCAG CGGTCTGTTC
GCGCTGGAGC CTGATGTGCC GCTGGTCGTG CCGGAAGTTA ACCCGTATGT ACTGGCGGAT
TACCGTAACC GTAACGTGAT TGCGGTCGCC GATAGTCTGA CCAGTCAACT GCTGGCGGCG
CTCAAGCCGT TAATCGATCA GGGGGGACTG TCGCGCATCG CCGTCACCAG TATGTTATCA
GCGTCCGCGC AGGGGAAAAA AGCGGTCGAT GCGCTGGCTG GACAGAGTGC GAAGCTGCTT
AACGGCATAC CGATTGATGA AGATGATTTC TTTGGCCGCC AGTTGGCGTT CAATATGCTG
CCGCTGCTGC CGGATCGGGA AGGCAGCGTG CGCCAGGAAC GTCGTATCGT CGATGAAGTG
CGTAAAATTT TGCAGGACGA TGGCGTGATG ATCTCCGCCA GTGTCGTGCA GTCACCGGTG
TTCTATGGCC ATGCGCAGAT GGTGAGCTTT GAAGCGCTCC GTCCGCTGGC GGCGGAAGAG
GCGCGCGAGG CATTTTCCCG CGGTGAAGAT ATCGTACTGT CAGAAGAGAC GGATTACCCG
ACGCAGGTGG GCGACGCTTC CGGCAATCCA CAGCTCTCTA TTGGCTGTGT GCATAATGAT
TACGGTATGC CGGAACAAAT TCAGTTCTGG TCAGTGGCGG ACAACGTGCG TTTCGGCGGC
GCGCTGATGG CCGTTAAAAT TGCGGAGAAG CTGGTGCAGG AGTATCTGTA CTGA
 
Protein sequence
MSEGWNIAIL GATGAVGEAL LETLAERQFP VGEIYALARH ESAGEHLRFG GKSVIVQDAA 
DFDWTQAQLA FFVAGAEASA AWIDDATNAG CLVIDSSGLF ALEPDVPLVV PEVNPYVLAD
YRNRNVIAVA DSLTSQLLAA LKPLIDQGGL SRIAVTSMLS ASAQGKKAVD ALAGQSAKLL
NGIPIDEDDF FGRQLAFNML PLLPDREGSV RQERRIVDEV RKILQDDGVM ISASVVQSPV
FYGHAQMVSF EALRPLAAEE AREAFSRGED IVLSEETDYP TQVGDASGNP QLSIGCVHND
YGMPEQIQFW SVADNVRFGG ALMAVKIAEK LVQEYLY