Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2644 |
Symbol | |
ID | 6873263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 2529224 |
End bp | 2530123 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642785711 |
Product | polysaccharide deacetylase domain-containing protein |
Protein accession | YP_002216368 |
Protein GI | 198242935 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAG TCGGTTTACG CATTGATGTT GATACCTTGC GAGGAACGCG TGAAGGTGTT CCCCGGCTGC TGGCGACATT GCATCGCCAC GGCGTTCAGG CCAGCTTTTT CTTCAGCGTC GGGCCGGACA ATATGGGACG TCATCTTTGG CGTCTGATAA GACCGCGATT TTTATGGAAA ATGCTACGTT CAAACGCCGC CTCGCTCTAC GGCTGGGATA TCCTGCTGGC CGGTACCGCC TGGCCGGGAA AAAATATCGG CAACGCTAAT GCCGGGATTA TTCGTGAAAC GGCAACATAC CATGAGACGG GACTACATGC CTGGGATCAC CATGCGTGGC AGACTCACAG CGGCCACTGG AGTATCCGCC AGCTTGAAGA AGATATTGCG CGCGGCATAA CGGCGCTTGA GGCCATTATC GGAAAACCCG TCACCTGCTC AGCCGCGGCC GGCTGGCGAG CGGATGGGCG CGTTGTTCGT GCGAAAGAAC CGTTCAACCT GAGGTATAAC AGCGATTGCC GTGGAACCAC CTTATTCCGT CCGCTACTGA TGCCGGGCCA GACAGGGACG CCGCAAATCC CGGTCACCTT ACCCACATGG GATGAGGTTA TCGGCCCCGC CGTTCAGGCG CAGTCGTTCA ATACCTGGAT TATCTCCCGT ATGTTGCAGG ACAAAGGCAC GCCGGTATAT ACCATCCATG CGGAAGTCGA AGGTATTGTC CATCAGCCGC TGTTTGAAGA TTTGCTCGTT CGTGCACGTG ACGCGGGGAT CACCTTTTGT CCTCTGGGCG AACTGCTGCC GACATCGCCT GAGTCTCTGC CGTTGGGGCA AATTGTACGT GGGCACATCC CTGGCCGTGA AGGTTGGCTG GGGTGCCAAC AGGCAGCGAG CGCCTCATGA
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Protein sequence | MTKVGLRIDV DTLRGTREGV PRLLATLHRH GVQASFFFSV GPDNMGRHLW RLIRPRFLWK MLRSNAASLY GWDILLAGTA WPGKNIGNAN AGIIRETATY HETGLHAWDH HAWQTHSGHW SIRQLEEDIA RGITALEAII GKPVTCSAAA GWRADGRVVR AKEPFNLRYN SDCRGTTLFR PLLMPGQTGT PQIPVTLPTW DEVIGPAVQA QSFNTWIISR MLQDKGTPVY TIHAEVEGIV HQPLFEDLLV RARDAGITFC PLGELLPTSP ESLPLGQIVR GHIPGREGWL GCQQAASAS
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