Gene SeD_A2544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2544 
Symbol 
ID6871530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2422811 
End bp2423245 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content52% 
IMG OID642785619 
Productputative transcriptional regulator 
Protein accessionYP_002216277 
Protein GI198245143 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.581927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.0799833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGCT GGGGAAAATT CAGCCGCGCA AGAGAGGGTA ACAGCGTGAA ATACAATACG 
ATGAATAACG ACGAGATTAT CCTGTCGTTG TGCGCCCGCT TAAAGGAGAC GCGCCTGTCT 
CTTTCGATGA CCCAGCAGCA GCTTGCCGAT CGCGCGCACG TTGGTATTGC CACCATCAAG 
CGTATCGAGA AGGGGGGAGG GCTCAATCTT GATACGTTAA TTTCTCTCCT GCGGGCGCTG 
GATAAGTTGC ATAATCTTGA TGCGGTGCTG TTTGAATCCG AGCTGCGTAA TTTTCACGAA 
AGTTATGAAG GTGGAGAGGG CAGCGGCCGC CTTCAGGTAC GCCAGCAGGC CGCGGATTTA 
AATAATAAAT CTTCCGCGCC GCAGTCGGAG GAGGTGAATT ACAGCGCGGC GCTGGAAAAT 
TCATTATGTT GGTGA
 
Protein sequence
MVRWGKFSRA REGNSVKYNT MNNDEIILSL CARLKETRLS LSMTQQQLAD RAHVGIATIK 
RIEKGGGLNL DTLISLLRAL DKLHNLDAVL FESELRNFHE SYEGGEGSGR LQVRQQAADL 
NNKSSAPQSE EVNYSAALEN SLCW