Gene SeD_A2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2542 
SymbolfolE 
ID6875353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2420967 
End bp2421635 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content53% 
IMG OID642785617 
ProductGTP cyclohydrolase I 
Protein accessionYP_002216275 
Protein GI198245121 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0154777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.157886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCAC TCAGTAAAGA AGCGGCCCTG GTTCATGACG CGCTGGTTGC CCGGGGGCTG 
GAAACGCCGC TGCGCCCGCC TATGGATGAA CTGGATAATG AAACGCGAAA AAGCCTTATC
GCAGGGCATA TGACTGAGAT TATGCAGTTG CTGAATCTCG ATTTGAGCGA TGACAGTCTG
ATGGAAACGC CGCATCGTAT CGCTAAGATG TACGTTGACG AGATTTTCGC CGGCCTCGAC
TATGCCAATT TCCCGAAAAT TACCCTCATT GAAAATAAAA TGAAGGTGGA TGAAATGGTC
ACCGTCCGCG ATATCACGCT GACCAGCACC TGTGAACATC ACTTCGTGAC CATTGATGGC
AAAGCGACCG TCGCGTATAT CCCCAAAGAT TCCGTGATCG GCCTGTCGAA AATTAACCGC
ATCGTGCAAT TCTTCGCCCA GCGTCCGCAG GTTCAGGAAC GTTTGACCCA ACAAATTCTG
ACGGCGCTGC AAACCTTGCT CGGCACCAAT AATGTAGCGG TATCGATTGA TGCGGTGCAT
TACTGCGTGA AAGCGCGCGG TATTCGTGAC GCAACCAGCG CCACGACGAC GACGTCGCTG
GGCGGATTGT TTAAGTCCAG CCAGAATACG CGCCAGGAGT TTCTGCGTGC CGTTCGCCAT
CATCCATGA
 
Protein sequence
MPSLSKEAAL VHDALVARGL ETPLRPPMDE LDNETRKSLI AGHMTEIMQL LNLDLSDDSL 
METPHRIAKM YVDEIFAGLD YANFPKITLI ENKMKVDEMV TVRDITLTST CEHHFVTIDG
KATVAYIPKD SVIGLSKINR IVQFFAQRPQ VQERLTQQIL TALQTLLGTN NVAVSIDAVH
YCVKARGIRD ATSATTTTSL GGLFKSSQNT RQEFLRAVRH HP