Gene SeD_A2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2517 
Symbol 
ID6875219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2398547 
End bp2399329 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content54% 
IMG OID642785597 
Productacetoin dehydrogenase 
Protein accessionYP_002216255 
Protein GI198244138 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCATC CGGAGAGGAA TATGACCAAA GTCGCAATTG TAACGGCATC AGATTCGGGA 
ATTGGCAAAG CGTGTGCGTT GTTATTAGCA CAAAACGGTT TTGATATTGG TATCACCTGG
CATTCCGATG AACGCGGCGC GCAGGAGACG GCGAAAAAAG CGGCGCAGTT TGGTGTGCGG
GCAGAGACCA TTCATCTTGA CCTGAGCAAG TTACCCGAGG GCGCGCAGGC CATTGAACAT
CTTATCCAGC GCCTGGGGCG CGTTGACGTG CTGGTCAATA ATGCCGGGGC GATGACCAAA
TCCGCGTTTA TTGATATGCC GTTTACGCAG TGGCGGCAAA TTTTTACCGT GGATGTCGAT
GGCGCGTTTC TCTGCGCGCA GATCGCCGCC CGGCATATGA TTAAACAAGG AGAGGGAGGG
CGCATTATCA ACATCACCTC CGTCCATGAG CATACGCCGC TTCCGCAAGC CAGCGCCTAT
ACCGCGGCGA AACATGCGTT GGGGGGATTG ACTAAATCCA TGGCGCTGGA ACTGATTGAG
CATCATATTT TGGTCAACGC CGTCGCGCCA GGCGCTATCG CCACGCCGAT GAATGATATG
GATGACAGCG ACATTGAGCC GGGATCGGAA CCCTCGATCC CTATCGCCCG ACCGGGTTCT
ACGCATGAAA TAGCCAGCCT CGTCGCCTGG CTGTGTTCGG AAGGCGCAAG CTATACCACC
GGTCAGTCGC TGATTGTCGA CGGCGGATTT ATGCTGGTGA ATCCGCAATT CAACGCAAAA
TAA
 
Protein sequence
MIHPERNMTK VAIVTASDSG IGKACALLLA QNGFDIGITW HSDERGAQET AKKAAQFGVR 
AETIHLDLSK LPEGAQAIEH LIQRLGRVDV LVNNAGAMTK SAFIDMPFTQ WRQIFTVDVD
GAFLCAQIAA RHMIKQGEGG RIINITSVHE HTPLPQASAY TAAKHALGGL TKSMALELIE
HHILVNAVAP GAIATPMNDM DDSDIEPGSE PSIPIARPGS THEIASLVAW LCSEGASYTT
GQSLIVDGGF MLVNPQFNAK