Gene SeD_A2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2505 
Symbol 
ID6874670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2384288 
End bp2385007 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content51% 
IMG OID642785585 
Productputative two-component response-regulatory protein YehT 
Protein accessionYP_002216243 
Protein GI198244322 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAG TGCTGATTGT GGATGATGAG CCGTTAGCGC GGGAAAATCT GCGGATTTTG 
CTCCAGGGGC AGGATGACAT TGAGATTGTG GGAGAGTGCG CGAACGCGGT AGAAGCGATT
GGCGCGGTAC ATAAGTTGCG ACCTGATGTG CTGTTTCTGG ATATTCAGAT GCCGCGTATC
AGTGGACTGG AGATGGTAGG AATGCTTGAT CCGGAACACC GCCCGTATAT CGTTTTTTTG
ACCGCATTTG ACGAATACGC CATCAAAGCC TTTGAAGAGC ACGCTTTTGA TTATCTGCTC
AAGCCGATAG AGGAGAAACG GCTGGAAAAA ACGTTACATC GTCTGCGTCA GGAGCGCAGT
AAACAGGATG TTTCGTTGTT GCCGGAAAAC CAGCAGGCGC TTAAATTCAT TCCCTGTACC
GGACACAGCC GGATCTATTT GTTGCAAATG GATGATGTCG CCTTTGTCAG TAGCCGTATG
AGCGGCGTTT ATGTGACCAG CAGTGAAGGG AAAGAGGGGT TTACCGAGCT GACGCTGCGC
ACGCTGGAAA GCCGGACGCC GCTACTGCGT TGTCATCGTC AGTTTCTGGT GAATATGGCC
CATTTGCAGG AAATTCGGCT GGAGGATAAT GGGCAGGCAG AGCTGATTTT ACGCAACGGC
CTGACGGTGC CGGTAAGCCG TCGCTATCTG AAAAGTTTAA AAGAGGCGAT TGGCCTGTAA
 
Protein sequence
MIKVLIVDDE PLARENLRIL LQGQDDIEIV GECANAVEAI GAVHKLRPDV LFLDIQMPRI 
SGLEMVGMLD PEHRPYIVFL TAFDEYAIKA FEEHAFDYLL KPIEEKRLEK TLHRLRQERS
KQDVSLLPEN QQALKFIPCT GHSRIYLLQM DDVAFVSSRM SGVYVTSSEG KEGFTELTLR
TLESRTPLLR CHRQFLVNMA HLQEIRLEDN GQAELILRNG LTVPVSRRYL KSLKEAIGL