Gene SeD_A2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2479 
Symbol 
ID6872198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2358353 
End bp2359069 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content57% 
IMG OID642785562 
Productputative inner membrane protein 
Protein accessionYP_002216220 
Protein GI198242389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTGGA TTGTTCTTAT TATTGCCGCC CTATTTTTTA GCTGGCGCAA CTACAAAAAA 
AACAAACCGC TGATTGCGGC CCGTATCGCC GAGGAGAAAG AAAAAGATCG CCTGAAAGAC 
CTGCGTCGCG ATACCCGACG GCGGCAATGG GCGCTGGCGC TAGCTGATAT CCTCGCCCGG 
CGCAACGGGC TACCGATCAA AGGCGTTGAG CTGGTATTTA AACTTGACGA TGACAAACGC 
CGCTATCTGG CGCAGCAGGT AAAAAAAGAG CTGGGCTTGA GCGAAAACCT CGACGGCGCG 
GCGTTACGCC ACAAGGTTGA GGATATCTTA CGCCGCTGGC CTGCGGGCAT CGGCAGCTCG 
CCGCGCACGT TTTATCATCA TCTGGCGGCC CAGGGCCAGG TCCGCGACGC GCTGGCCTTC 
GACTGTATGC GCACCGCCTT TCTGACCCGC TGTATCGCCG GGCTCGGCTG GTGTAACGAA 
AACGAGGCCT GGCTGGTGCT ATTGCTCAAC GCCCAGCGCG CTCAGGACTG TTTTGATTCC 
TGGGAGGATT ACGCCACCGC CTACGTTCGC GCTCGCCGGG TATGGCTCAC GCTACGTGAC 
ACGCCAACAG CGCTTGCCGG ACGGGATTTA CAGGAAGCCA CCCATTATCT GCAAGACCCT 
GTCAGCCGCT GGCGACAACT GCCGTGGAAT GAATTCAAAA TTTTCGAGCC GATTTAA
 
Protein sequence
MFWIVLIIAA LFFSWRNYKK NKPLIAARIA EEKEKDRLKD LRRDTRRRQW ALALADILAR 
RNGLPIKGVE LVFKLDDDKR RYLAQQVKKE LGLSENLDGA ALRHKVEDIL RRWPAGIGSS 
PRTFYHHLAA QGQVRDALAF DCMRTAFLTR CIAGLGWCNE NEAWLVLLLN AQRAQDCFDS 
WEDYATAYVR ARRVWLTLRD TPTALAGRDL QEATHYLQDP VSRWRQLPWN EFKIFEPI