| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2472 |
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| Symbol | |
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| ID | 6872538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 2345907 |
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| End bp | 2347148 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642785555 |
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| Product | multidrug efflux system subunit MdtA |
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| Protein accession | YP_002216213 |
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| Protein GI | 198243856 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.957345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCA GTAATACTTT CCGCTGGGCA ATAGCGATTG GGGTTGTAGT GGCCGCCGCC
GCATTCTGGT TCTGGCATAG CCGTAGCGGA AGCCCGACCG CCGCGCCGGG CGTCGCCGCG
CAAGCGCCGC ATACCGCCGC CGCAGGTCGC CGCGGTATGC GCGACGGCCC TCTGGCGCCG
GTACAGGCCG CGACCGCGAC CACGCAGGCC GTACCGCGCT ATCTGAGCGG GCTGGGTACC
GTGACCGCCG CGAATACCGT TACGGTGCGT AGCCGCGTGG ATGGTCAACT CATCTCCCTG
CACTTTCAGG AAGGTCAGCA GGTCAACGCA GGCGATCTGC TGGCGCAAAT CGATCCCAGC
CAGTTTAAGG TCGCCCTGGC GCAGGCTCAG GGACAGTTGG CGAAAGATAA CGCTACGCTG
GCGAATGCGC GTCGTGATCT GGCGCGCTAT CAGCAACTGG CAAAAACCAA TCTGGTTTCC
CGTCAGGAAC TGGATGCGCA ACAGGCGCTG GTCAACGAAA CCCAGGGAAC CATTAAAGCG
GATGAAGCCA ATGTCGCCAG CGCGCAGTTA CAGCTCGACT GGAGTCGTAT CACGGCCCCG
GTCTCGGGAC GCGTGGGTCT GAAACAGGTG GATGTCGGCA ACCAGATTTC CAGCAGCGAT
ACCGCAGGTA TTGTCGTCAT TACGCAAACG CACCCGATTG ATCTCATTTT TACTCTGCCG
GAAAGCGATA TCGCGACCGT GGTTCAGGCG CAGAAAGCGG GGAAAACGCT GGTCGTAGAA
GCCTGGGATC GGACTAACTC GCACAAATTG AGCGAAGGTG TGTTGCTCAG TCTGGACAAC
CAGATTGATC CCACAACGGG AACGATCAAA ATTAAAGCGC GCTTTACCAA TCAGGACGAT
ACGCTGTTCC CCAATCAATT TGTGAACGCC CGGATGCTGG TCGATACCGA ACAAAATGCC
GTTGTGGTGC CTGCCGCGGC GGTGCAAATG GGCAATGAGG GCCACTTTGT GTGGGTGCTG
AACGACGAAA ATAACGTCAG CAAGAAGCGG GTAAAAATCG GTATTCAGGA TAACCGAAAC
GTGGTGATCA GCGCTGGCTT GTCGGCAGGC GATCGCGTCG TTACCGATGG TATTGATCGG
CTGACGGAAG GCGCAAAAGT CGAGGTCGTT GAGCCGCAAA CCACCGTGGC GGATGAAAAA
TCCCCTTCCC GCCATGAAGG TCAAAAAGGA GCGCGCGCCT GA
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| Protein sequence | MKGSNTFRWA IAIGVVVAAA AFWFWHSRSG SPTAAPGVAA QAPHTAAAGR RGMRDGPLAP
VQAATATTQA VPRYLSGLGT VTAANTVTVR SRVDGQLISL HFQEGQQVNA GDLLAQIDPS
QFKVALAQAQ GQLAKDNATL ANARRDLARY QQLAKTNLVS RQELDAQQAL VNETQGTIKA
DEANVASAQL QLDWSRITAP VSGRVGLKQV DVGNQISSSD TAGIVVITQT HPIDLIFTLP
ESDIATVVQA QKAGKTLVVE AWDRTNSHKL SEGVLLSLDN QIDPTTGTIK IKARFTNQDD
TLFPNQFVNA RMLVDTEQNA VVVPAAAVQM GNEGHFVWVL NDENNVSKKR VKIGIQDNRN
VVISAGLSAG DRVVTDGIDR LTEGAKVEVV EPQTTVADEK SPSRHEGQKG ARA
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