Gene SeD_A2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2454 
Symbol 
ID6873025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2329103 
End bp2329591 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content56% 
IMG OID642785543 
Productputative colanic acid biosynthesis acetyltransferase WcaB 
Protein accessionYP_002216201 
Protein GI198245610 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.0245254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAG ACTTACGCGC GAATAGCTGG AGCTTACGCC CCTGTTGCAT GGTGCTGGCC 
TACCGTATCG CTCATTTTTG TTCCGTCTGG CGCAAAAAGA ATGTGCTGAA TAATCTGTGG
GCCGCGCCGG TGCTGGTGCT GTATCGCGTG ATCACGGAAT GCCTGTTCGG GTATGAAATC
CAGGCCGCCG CGACCATTGG TCGGCGGTTC ACTATCCATC ATGGTTACGC GGTAGTGATT
AACAAACATG TCGTCGCCGG CGACGATTTT ACCATTCGCC ACGGCGTCAC CATTGGCAAT
CGCGGCGCGG ACAGCCTGGC TTGTCCGGTG ATTGGTCACG GCGTTGAGCT GGGGGCGAAT
GTCATCCTGC TTGGCGATAT TACTATCGGT AATCACGTCA CGATTGGCGC GGGTAGCGTG
GTACTTGACA GTATTCCGGA CCATGCGCTG GTGGTGGGAG AAAAAGCACG GGTGAAGGTC
AGCACATGA
 
Protein sequence
MLEDLRANSW SLRPCCMVLA YRIAHFCSVW RKKNVLNNLW AAPVLVLYRV ITECLFGYEI 
QAAATIGRRF TIHHGYAVVI NKHVVAGDDF TIRHGVTIGN RGADSLACPV IGHGVELGAN
VILLGDITIG NHVTIGAGSV VLDSIPDHAL VVGEKARVKV ST